RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 MIPEPQ99797 713 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 NOGQ13253 232 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 ADGRE1Q14246 886 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 OXR1Q8N573 874 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 ARHGEF4Q9NR80 690 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 PLK2Q9NYY3 685 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 CLPXO76031 633 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 COL6A1P12109 1028 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 SP100P23497 879 aaPredicted RBP12.87□□□□□ -0.35
HLCS-201ENST00000336648 HSPA7P48741 367 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 CCNHP51946 323 aaPredicted RBP12.87□□□□□ -0.35
HLCS-201ENST00000336648 AP2S1P53680 142 aaPredicted RBP12.87□□□□□ -0.35
HLCS-201ENST00000336648 QPCTQ16769 361 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 GXYLT1Q4G148 440 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 SDHAF4Q5VUM1 108 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 NR4A3Q92570 626 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 LENG8Q96PV6 779 aaPredicted RBP12.87□□□□□ -0.35
HLCS-201ENST00000336648 MKKSQ9NPJ1 570 aaPredicted RBP12.87□□□□□ -0.35
HLCS-201ENST00000336648 CFL2Q9Y281 166 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 PCDHA2Q9Y5H9 948 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 ITGA10O75578 1167 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 MMP3P08254 477 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 DDX6P26196 483 aaKnown RBP eCLIP12.87□□□□□ -0.35
HLCS-201ENST00000336648 SLC9A3P48764 834 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 SPATS1Q496A3 300 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 LINGO2Q7L985 606 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 ADGRD2Q7Z7M1 963 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 TMEM110Q86TL2 294 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 SERPINA9Q86WD7 417 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 LCN9Q8WX39 176 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 TRIM43Q96BQ3 446 aaPredicted RBP12.87□□□□□ -0.35
HLCS-201ENST00000336648 TLCD1Q96CP7 247 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 NEUROD4Q9HD90 331 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 FBXO9Q9UK97 447 aaPredicted RBP12.87□□□□□ -0.35
HLCS-201ENST00000336648 MRPS17Q9Y2R5 130 aaKnown RBP12.87□□□□□ -0.35
HLCS-201ENST00000336648 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.86□□□□□ -0.35
HLCS-201ENST00000336648 NUAK1O60285 661 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 PSKH1P11801 424 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 FBXO43Q4G163 708 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 HAGHLQ6PII5 290 aaPredicted RBP12.86□□□□□ -0.35
HLCS-201ENST00000336648 SLC22A18Q96BI1 424 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 TIMM22Q9Y584 194 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 PCDHGB2Q9Y5G2 931 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 FABP12A6NFH5 140 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 AZGP1P25311 298 aaKnown RBP12.86□□□□□ -0.35
HLCS-201ENST00000336648 FSTL1Q12841 308 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 TBC1D25Q3MII6 688 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 GPR33Q49SQ1 333 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 ARSHQ5FYA8 562 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 FBXO22Q8NEZ5 403 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 SETD6Q8TBK2 473 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 THRSPQ92748 146 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 TESCQ96BS2 214 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 ZNF570Q96NI8 536 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 ZNF599Q96NL3 588 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 SH3D21A4FU49 640 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 DCLK1O15075 740 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 ALPPP05187 535 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 C8BP07358 591 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 ICAM3P32942 547 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 ACSL1P33121 698 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 PSMD8P48556 350 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 IDH3AP50213 366 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 GBX2P52951 348 aaPredicted RBP12.86□□□□□ -0.35
HLCS-201ENST00000336648 GBE1Q04446 702 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 IQCCQ4KMZ1 466 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 RGMBQ6NW40 437 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 AMIGO1Q86WK6 493 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 ANKHQ9HCJ1 492 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 MTMR10Q9NXD2 777 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 FKBP7Q9Y680 259 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 NDUFS1P28331 727 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 BLKP51451 505 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 JAM2P57087 298 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 CBLBQ13191 982 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 UGCGQ16739 394 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 PLEKHG6Q3KR16 790 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 HSDL1Q3SXM5 330 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 ABCA11PQ4W5N1 156 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 KLHL26Q53HC5 615 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 KLHL36Q8N4N3 616 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 ERVK-5Q9HDB9 667 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 PHF24Q9UPV7 400 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 SCAMP3O14828 347 aaKnown RBP12.86□□□□□ -0.35
HLCS-201ENST00000336648 PGAM2P15259 253 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 LHCGRP22888 699 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 ARL2P36404 184 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 FSTL4Q6MZW2 842 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 MBOAT1Q6ZNC8 495 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 AVL9Q8NBF6 648 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 GATA5Q9BWX5 397 aaPredicted RBP12.86□□□□□ -0.35
HLCS-201ENST00000336648 LRRC3Q9BY71 257 aa12.86□□□□□ -0.35
HLCS-201ENST00000336648 ILVBLA1L0T0 632 aa12.85□□□□□ -0.35
HLCS-201ENST00000336648 OR1F1O43749 312 aa12.85□□□□□ -0.35
HLCS-201ENST00000336648 KAT7O95251 611 aa12.85□□□□□ -0.35
HLCS-201ENST00000336648 GOT2P00505 430 aaKnown RBP12.85□□□□□ -0.35
HLCS-201ENST00000336648 UGT1A3P35503 534 aa12.85□□□□□ -0.35
HLCS-201ENST00000336648 SCNN1AP37088 669 aa12.85□□□□□ -0.35
HLCS-201ENST00000336648 CLCN4P51793 760 aa12.85□□□□□ -0.35
HLCS-201ENST00000336648 CCL23P55773 120 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms