RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 NAGSQ8N159 534 aa20.94■□□□□ 0.94
TPM1-204ENST00000334895 SLC25A45Q8N413 288 aa20.94■□□□□ 0.94
TPM1-204ENST00000334895 PDPRQ8NCN5 879 aa20.94■□□□□ 0.94
TPM1-204ENST00000334895 OR5K2Q8NHB8 316 aa20.94■□□□□ 0.94
TPM1-204ENST00000334895 IL21RQ9HBE5 538 aa20.94■□□□□ 0.94
TPM1-204ENST00000334895 CD274Q9NZQ7 290 aa20.94■□□□□ 0.94
TPM1-204ENST00000334895 SIRPGQ9P1W8 387 aa20.94■□□□□ 0.94
TPM1-204ENST00000334895 RIF1Q5UIP0 2472 aaKnown RBP20.94■□□□□ 0.94
TPM1-204ENST00000334895 EP300Q09472 2414 aaPredicted RBP20.94■□□□□ 0.94
TPM1-204ENST00000334895 FAM186AA6NE01 2351 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 A0A1B0GTQ1 180 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 LMO7DNF2Z398 122 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 MYO1CO00159 1063 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 BIRC5O15392 142 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 TPBGLP0DKB5 382 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 TAC1P20366 129 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 HALP42357 657 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 CDKL1Q00532 357 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 NFKB2Q00653 900 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 IL9RQ01113 521 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 C18orf21Q32NC0 220 aaPredicted RBP20.93■□□□□ 0.94
TPM1-204ENST00000334895 FBXO48Q5FWF7 155 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 CES4AQ5XG92 561 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 MTERF4Q7Z6M4 381 aaKnown RBP20.93■□□□□ 0.94
TPM1-204ENST00000334895 GKN2Q86XP6 184 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 DCUN1D3Q8IWE4 304 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 PTGR2Q8N8N7 351 aaPredicted RBP20.93■□□□□ 0.94
TPM1-204ENST00000334895 FAM46DQ8NEK8 389 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 MCOLN3Q8TDD5 553 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 PHF21BQ96EK2 531 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 PKP4Q99569 1192 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 NRTNQ99748 197 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 ARL15Q9NXU5 204 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 GMEB2Q9UKD1 530 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 ZFHX2Q9C0A1 2572 aaPredicted RBP20.93■□□□□ 0.94
TPM1-204ENST00000334895 TRBV23OR9-2A0A075B6M9 112 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 TAPBPO15533 448 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 SMIM24O75264 130 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 FGF3P11487 239 aaPredicted RBP20.93■□□□□ 0.94
TPM1-204ENST00000334895 GFAPP14136 432 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 MAP4P27816 1152 aaKnown RBP20.93■□□□□ 0.94
TPM1-204ENST00000334895 EPHA8P29322 1005 aaPredicted RBP20.93■□□□□ 0.94
TPM1-204ENST00000334895 SLC19A1P41440 591 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 ARRB1P49407 418 aaPredicted RBP20.93■□□□□ 0.94
TPM1-204ENST00000334895 PRKAA2P54646 552 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 PRKG2Q13237 762 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 TCEAL6Q6IPX3 200 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 KANSL1Q7Z3B3 1105 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 NUDCD3Q8IVD9 361 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 TBC1D21Q8IYX1 336 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 FBXO39Q8N4B4 442 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 OR2I1PQ8NGU4 316 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 TCEAL3Q969E4 200 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 RHBDF1Q96CC6 855 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 MOCOSQ96EN8 888 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 FERD3LQ96RJ6 166 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 TRIT1Q9H3H1 467 aaKnown RBP20.93■□□□□ 0.94
TPM1-204ENST00000334895 ACSS2Q9NR19 701 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 NCKIPSDQ9NZQ3 722 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 NCDNQ9UBB6 729 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 ASB1Q9Y576 335 aa20.93■□□□□ 0.94
TPM1-204ENST00000334895 WDR87Q6ZQQ6 2873 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 LRRC14BA6NHZ5 514 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 ARHGAP33O14559 1287 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 IPO13O94829 963 aaKnown RBP20.92■□□□□ 0.94
TPM1-204ENST00000334895 GIMD1P0DJR0 217 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 MDH1P40925 334 aaKnown RBP20.92■□□□□ 0.94
TPM1-204ENST00000334895 AGTR2P50052 363 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 AP1S2P56377 157 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 DEFB133Q30KQ1 61 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 OR6Y1Q8NGX8 325 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 ZDHHC1Q8WTX9 485 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 TMEM237Q96Q45 408 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 TMEM79Q9BSE2 394 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 HGH1Q9BTY7 390 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 MENTQ9BUN1 341 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 TRIM54Q9BYV2 358 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 GAREM1Q9H706 876 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 PTBP2Q9UKA9 531 aaKnown RBP20.92■□□□□ 0.94
TPM1-204ENST00000334895 PLAGL1Q9UM63 463 aa20.92■□□□□ 0.94
TPM1-204ENST00000334895 SIX3O95343 332 aaPredicted RBP20.91■□□□□ 0.94
TPM1-204ENST00000334895 HIST1H2AGP0C0S8 130 aaPredicted RBP20.91■□□□□ 0.94
TPM1-204ENST00000334895 HIST1H2ADP20671 130 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 BGNP21810 368 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 ALDH18A1P54886 795 aaKnown RBP20.91■□□□□ 0.94
TPM1-204ENST00000334895 SETDB1Q15047 1291 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 CDKL4Q5MAI5 379 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 LIPMQ5VYY2 423 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 TTC19Q6DKK2 380 aaPredicted RBP20.91■□□□□ 0.94
TPM1-204ENST00000334895 ZCCHC23Q6ZST2 131 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 TAX1BP1Q86VP1 789 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 SDR16C5Q8N3Y7 309 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 SFRP1Q8N474 314 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 OR9A1PQ8NGU1 263 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 SLC37A2Q8TED4 501 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 CKAP2Q8WWK9 683 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 ESAMQ96AP7 390 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 HIST1H2AHQ96KK5 128 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 HIST1H2AJQ99878 128 aa20.91■□□□□ 0.94
TPM1-204ENST00000334895 EGFL8Q99944 293 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms