RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 CLIC1O00299 241 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 IRAK2O43187 625 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 ERAL1O75616 437 aaKnown RBP13.79□□□□□ -0.2
EPHB3-201ENST00000330394 CHRNA1P02708 482 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 ITGB1P05556 798 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 CYP3A5P20815 502 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 LGALS3BPQ08380 585 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 TSTQ16762 297 aaKnown RBP13.79□□□□□ -0.2
EPHB3-201ENST00000330394 CRTC2Q53ET0 693 aaPredicted RBP13.79□□□□□ -0.2
EPHB3-201ENST00000330394 UBE2UQ5VVX9 321 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 MACC1Q6ZN28 852 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 OR8H3Q8N146 312 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 ARRDC4Q8NCT1 418 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 FRS2Q8WU20 508 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 ANKRD49Q8WVL7 239 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 STARD8Q92502 1023 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 AP3S1Q92572 193 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 MRPS31Q92665 395 aaKnown RBP13.79□□□□□ -0.2
EPHB3-201ENST00000330394 NSUN3Q9H649 340 aaKnown RBP13.79□□□□□ -0.2
EPHB3-201ENST00000330394 MCUBQ9NWR8 336 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 MARCH4Q9P2E8 410 aaPredicted RBP13.79□□□□□ -0.2
EPHB3-201ENST00000330394 CNOT11Q9UKZ1 510 aaKnown RBP13.79□□□□□ -0.2
EPHB3-201ENST00000330394 RNF11Q9Y3C5 154 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 HSPB11Q9Y547 144 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 TRPV2Q9Y5S1 764 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 MYO5AQ9Y4I1 1855 aaKnown RBP13.78□□□□□ -0.2
EPHB3-201ENST00000330394 DHFRP00374 187 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 ANXA4P09525 319 aaPredicted RBP13.78□□□□□ -0.2
EPHB3-201ENST00000330394 SMIM18P0DKX4 95 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 SERPINA4P29622 427 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 NAE1Q13564 534 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 TMEM199Q8N511 208 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 XAGE5Q8WWM1 108 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 TMEM169Q96HH4 297 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 MFSD1Q9H3U5 465 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 ZFYVE1Q9HBF4 777 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 CFL2Q9Y281 166 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 PCDHGB5Q9Y5G0 923 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 GABRDO14764 452 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 MITFO75030 526 aaPredicted RBP13.78□□□□□ -0.2
EPHB3-201ENST00000330394 DUSP4Q13115 394 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 GHDCQ8N2G8 530 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 ZFP90Q8TF47 636 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 SIPA1Q96FS4 1042 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 MYRFLQ96LU7 910 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 FAM118AQ9NWS6 357 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 PAQR5Q9NXK6 330 aaPredicted RBP13.78□□□□□ -0.2
EPHB3-201ENST00000330394 AHSPQ9NZD4 102 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 NUDT4Q9NZJ9 180 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 ZIM2Q9NZV7 527 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 EVLQ9UI08 416 aaPredicted RBP13.78□□□□□ -0.2
EPHB3-201ENST00000330394 GIT1Q9Y2X7 761 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 PARP4Q9UKK3 1724 aaKnown RBP13.78□□□□□ -0.2
EPHB3-201ENST00000330394 FADS2P1A8MWK0 482 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 H0YJX3 145 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 TBL1XO60907 577 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 IGSF6O95976 241 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 TBRG1Q3YBR2 411 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 CXorf57Q6NSI4 855 aaKnown RBP13.78□□□□□ -0.2
EPHB3-201ENST00000330394 PPTC7Q8NI37 304 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 PPCDCQ96CD2 204 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 FNDC11Q9BVV2 318 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 OLAHQ9NV23 265 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 TVP23BQ9NYZ1 205 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 ZNF232Q9UNY5 417 aa13.78□□□□□ -0.2
EPHB3-201ENST00000330394 ZNF142P52746 1687 aaPredicted RBP13.77□□□□□ -0.2
EPHB3-201ENST00000330394 ADAMDEC1O15204 470 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 ACVRL1P37023 503 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 ARSDP51689 593 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 HUNKP57058 714 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 DNAJB13P59910 316 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 CLDN10P78369 228 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 TCEA2Q15560 299 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 AKIRIN2Q53H80 203 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 LAPTM4BQ86VI4 370 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 SERPINA9Q86WD7 417 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 OR10G2Q8NGC3 310 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 RTP4Q96DX8 246 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 ZNF641Q96N77 438 aaPredicted RBP13.77□□□□□ -0.2
EPHB3-201ENST00000330394 MED28Q9H204 178 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 ERVK13-1Q9NX77 482 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 MAPRE3Q9UPY8 281 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 KCNE2Q9Y6J6 123 aa13.77□□□□□ -0.2
EPHB3-201ENST00000330394 H0YAE9 185 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 ERICH5Q6P6B1 374 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 ENPP6Q6UWR7 440 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 ASCC1Q8N9N2 400 aaKnown RBP13.77□□□□□ -0.21
EPHB3-201ENST00000330394 C2orf49Q9BVC5 232 aaPredicted RBP13.77□□□□□ -0.21
EPHB3-201ENST00000330394 EMILIN2Q9BXX0 1053 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 MEAF6Q9HAF1 191 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 SGK2Q9HBY8 427 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 CCDC59Q9P031 241 aaKnown RBP13.77□□□□□ -0.21
EPHB3-201ENST00000330394 SLC1A7O00341 560 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 KPNA3O00505 521 aaPredicted RBP13.77□□□□□ -0.21
EPHB3-201ENST00000330394 ZNF26P17031 533 aaPredicted RBP13.77□□□□□ -0.21
EPHB3-201ENST00000330394 ENGP17813 658 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 WARSP23381 471 aaKnown RBP13.77□□□□□ -0.21
EPHB3-201ENST00000330394 DNAJA1P31689 397 aaKnown RBP13.77□□□□□ -0.21
EPHB3-201ENST00000330394 ANXA11P50995 505 aaKnown RBP13.77□□□□□ -0.21
EPHB3-201ENST00000330394 CRYBB1P53674 252 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms