RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 TTC34A8MYJ7 566 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 GMFGO60234 142 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 SRPRAP08240 638 aaKnown RBP16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 PKMP14618 531 aaKnown RBP16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 HSD17B12Q53GQ0 312 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 ZNF431Q8TF32 576 aaPredicted RBP16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 MIPEPQ99797 713 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 CORO1BQ9BR76 489 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 SLC35G6P0C7Q6 338 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 SLC10A7Q0GE19 358 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 SLC22A16Q86VW1 577 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 GEMIN6Q8WXD5 167 aaKnown RBP16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 GPR21Q99679 349 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 TMLHEQ9NVH6 421 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 WASF2Q9Y6W5 498 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 SCGB2B2Q4G0G5 96 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 GALNT12Q8IXK2 581 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 GPR135Q8IZ08 494 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 SLC37A3Q8NCC5 494 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 TLCD1Q96CP7 247 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 GDAP2Q9NXN4 497 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 UBQLN2Q9UHD9 624 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 PDHXO00330 501 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 KLRC4O43908 158 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 CPN2P22792 545 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 PTP4A2Q12974 167 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 IKBKEQ14164 716 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 KIAA0319LQ8IZA0 1049 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 DNAJC19Q96DA6 116 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 OR51V1Q9H2C8 321 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 SCGB1D2O95969 90 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 ZNF14P17017 642 aaPredicted RBP16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 NT5EP21589 574 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 GNA12Q03113 381 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 ZACNQ401N2 412 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 LHFPL3Q86UP9 236 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 METTL21AQ8WXB1 218 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 RBM18Q96H35 190 aaKnown RBP16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 GLIS3Q8NEA6 775 aa16.58■□□□□ 0.25
SMCHD1-201ENST00000320876 LRRN4Q8WUT4 740 aa16.58■□□□□ 0.25
SMCHD1-201ENST00000320876 SEC14L1Q92503 715 aa16.58■□□□□ 0.25
SMCHD1-201ENST00000320876 ITFG2Q969R8 447 aa16.58■□□□□ 0.25
SMCHD1-201ENST00000320876 ZSCAN5AQ9BUG6 496 aa16.58■□□□□ 0.25
SMCHD1-201ENST00000320876 TMED5Q9Y3A6 229 aa16.58■□□□□ 0.25
SMCHD1-201ENST00000320876 SCNN1GP51170 649 aa16.58■□□□□ 0.25
SMCHD1-201ENST00000320876 ZNF527Q8NB42 609 aa16.58■□□□□ 0.25
SMCHD1-201ENST00000320876 ATAD1Q8NBU5 361 aa16.58■□□□□ 0.25
SMCHD1-201ENST00000320876 NCSTNQ92542 709 aa16.58■□□□□ 0.25
SMCHD1-201ENST00000320876 TIMM22Q9Y584 194 aa16.58■□□□□ 0.25
SMCHD1-201ENST00000320876 SPATA31A1Q5TZJ5 1347 aa16.58■□□□□ 0.25
SMCHD1-201ENST00000320876 EPHB6O15197 1021 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 NDST3O95803 873 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 CMPK1P30085 196 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 MASP1P48740 699 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 MSANTD2Q6P1R3 559 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 KIAA1324Q6UXG2 1013 aaKnown RBP16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 HAS1Q92839 578 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 TMEM39AQ9NV64 488 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 CYTH4Q9UIA0 394 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 TCAF1Q9Y4C2 921 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 SPIN1Q9Y657 262 aaPredicted RBP16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 KAT2AQ92830 837 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 PMM1Q92871 262 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 A0A1W2PQ67 120 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 CXCL11O14625 94 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 ALPPP05187 535 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 RPA4Q13156 261 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 DDTLA6NHG4 134 aaPredicted RBP16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 TLR5O60602 858 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 PSMD10O75832 226 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 RAB36O95755 333 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 ANXA8P13928 327 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 BMP6P22004 513 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 FASTKD3Q14CZ7 662 aaKnown RBP16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 DCAKDQ8WVC6 231 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 NKD2Q969F2 451 aaPredicted RBP16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 TAPBPLQ9BX59 468 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 CDT1Q9H211 546 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 RIMKLBQ9ULI2 386 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 ILVBLA1L0T0 632 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 TCAF2A6NFQ2 919 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 PIP5K1BO14986 540 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 PAOXQ6QHF9 649 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 BANPQ8N9N5 519 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 TRPM4Q8TD43 1214 aa16.58■□□□□ 0.24
SMCHD1-201ENST00000320876 E9PAM4 449 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 GSTM3P21266 225 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 NADK2Q4G0N4 442 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 SH3D19Q5HYK7 790 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 CMAHPQ9Y471 501 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 RIMS1Q86UR5 1692 aaKnown RBP16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 EI24O14681 340 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 MFSD11O43934 449 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 SAMD14Q8IZD0 417 aaPredicted RBP16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 MTHFD1P11586 935 aaKnown RBP16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 ITPK1Q13572 414 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 NPTX1Q15818 432 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 GRK1Q15835 563 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 TMEM110Q86TL2 294 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms