RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 HTR3BO95264 441 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 FCER2P06734 321 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 FCGR1AP12314 374 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 SLC2A4P14672 509 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 SYN1P17600 705 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 FASP25445 335 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 POU1F1P28069 291 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CD68P34810 354 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 KPNA2P52292 529 aaKnown RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 PIGFQ07326 219 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 PRKAA1Q13131 559 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 EIF4EBP2Q13542 120 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 DMC1Q14565 340 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 GRK1Q15835 563 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 RUNDC3AQ59EK9 446 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF667Q5HYK9 610 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 TRNP1Q6NT89 227 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ZDHHC13Q8IUH4 622 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF781Q8N8C0 355 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 RDH13Q8NBN7 331 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 KCTD6Q8NC69 237 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 C3orf58Q8NDZ4 430 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 OR6M1Q8NGM8 313 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 OR6S1Q8NH40 331 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 MAGEE2Q8TD90 523 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 STYXQ8WUJ0 223 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CAMKK2Q96RR4 588 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 NPAS2Q99743 824 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ELOVL4Q9GZR5 314 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ILKAPQ9H0C8 392 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ZCCHC4Q9H5U6 513 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CCM2LQ9NUG4 571 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 OSER1Q9NX31 292 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ACTR10Q9NZ32 417 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CD300AQ9UGN4 299 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 SEPT9Q9UHD8 586 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 SLC6A14Q9UN76 642 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 PCDHGB2Q9Y5G2 931 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 KHNYNO15037 678 aaKnown RBP6.52□□□□□ -1.37
ZNF540-201ENST00000316433 SGCEO43556 437 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 TLL1O43897 1013 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 PRMT3O60678 531 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 UGT2B17O75795 530 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 SLC25A27O95847 323 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 ITGBL1O95965 494 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-201ENST00000316433 JUPP14923 745 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 IL7RP16871 459 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 ZNF16P17020 682 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-201ENST00000316433 RFX2P48378 723 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 PCP4P48539 62 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 KCNJ5P48544 419 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 ARSDP51689 593 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 UGT2B15P54855 530 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 KCNK10P57789 538 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 PUDPQ08623 228 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 SIM2Q14190 667 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-201ENST00000316433 AAK1Q2M2I8 961 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 SMTNL2Q2TAL5 461 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 HSD17B12Q53GQ0 312 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 CLLU1Q5K131 121 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 MACC1Q6ZN28 852 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 KRT74Q7RTS7 529 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 THAP5Q7Z6K1 395 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 GALNT10Q86SR1 603 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 DHFR2Q86XF0 187 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 APOBEC3FQ8IUX4 373 aaKnown RBP6.52□□□□□ -1.37
ZNF540-201ENST00000316433 NANPQ8TBE9 248 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 ELMO1Q92556 727 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 TRIM43Q96BQ3 446 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-201ENST00000316433 LGALS12Q96DT0 336 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 ZDHHC12Q96GR4 267 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 SLC45A3Q96JT2 553 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 OR2A14Q96R47 310 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 PI4K2AQ9BTU6 479 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 KIFC3Q9BVG8 833 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 TRIM8Q9BZR9 551 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 FAM49AQ9H0Q0 323 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-201ENST00000316433 UNC93B1Q9H1C4 597 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 TTYH1Q9H313 450 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-201ENST00000316433 OSGEPL1Q9H4B0 414 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 FAM83DQ9H4H8 585 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 MEAF6Q9HAF1 191 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 ZBTB26Q9HCK0 441 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 CTSFQ9UBX1 484 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 RPS6KA6Q9UK32 745 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 PNMA8BQ9ULN7 279 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-201ENST00000316433 FZD10Q9ULW2 581 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 PDE10AQ9Y233 779 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 U3KQV3 271 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 MYLKQ15746 1914 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 A0A087X1B8 175 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 PNMA8CA0A1B0GUJ8 204 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 ATP6AP2A0A1C7CYW4 349 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 RPS10-NUDT3A0A1W2PQS6 291 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 ARGFXA6NJG6 315 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 AQP12BA6NM10 295 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 DCLK1O15075 740 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 PRPSAP2O60256 369 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 HBP1O60381 514 aa6.52□□□□□ -1.37
ZNF540-201ENST00000316433 PAPSS2O95340 614 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms