RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 FAM49BQ9NUQ9 324 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 OGDHLQ9ULD0 1010 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 MARCH11A6NNE9 402 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 A8MXK9 166 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 TATP17735 454 aaPredicted RBP9.16□□□□□ -0.94
BDNF-201ENST00000314915 GATMP50440 423 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 ACTR1AP61163 376 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 TRIM60Q495X7 471 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 ARHGAP17Q68EM7 881 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 VASNQ6EMK4 673 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 PRR5LQ6MZQ0 368 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 DHFR2Q86XF0 187 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 CA5BP1Q8WTZ4 195 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 HTR3CQ8WXA8 447 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 KAT5Q92993 513 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 RFT1Q96AA3 541 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 MS4A7Q9GZW8 240 aaPredicted RBP9.16□□□□□ -0.94
BDNF-201ENST00000314915 ZNF395Q9H8N7 513 aaPredicted RBP9.16□□□□□ -0.94
BDNF-201ENST00000314915 F5H6K3 240 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 B4GAT1O43505 415 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 PAK4O96013 591 aaPredicted RBP9.16□□□□□ -0.94
BDNF-201ENST00000314915 KLRC2P26717 231 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 CRABP1P29762 137 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 EPHA5P54756 1037 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 GTF2BQ00403 316 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 RPL6Q02878 288 aaKnown RBP9.16□□□□□ -0.94
BDNF-201ENST00000314915 ZNF528Q3MIS6 628 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 FAM92BQ6ZTR7 304 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 HUS1BQ8NHY5 278 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 C19orf60Q96EN9 201 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 TRNT1Q96Q11 434 aaKnown RBP9.16□□□□□ -0.94
BDNF-201ENST00000314915 CPEB1Q9BZB8 566 aaKnown RBP9.16□□□□□ -0.94
BDNF-201ENST00000314915 CCDC90BQ9GZT6 254 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 ENAMQ9NRM1 1142 aa9.16□□□□□ -0.94
BDNF-201ENST00000314915 SCN4AP35499 1836 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 G3V2T6 193 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 H0YIN7 160 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 NRP2O60462 931 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 RFX2P48378 723 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 RFX5P48382 616 aaPredicted RBP9.15□□□□□ -0.94
BDNF-201ENST00000314915 CCR9P51686 369 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 MVKQ03426 396 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 AOC3Q16853 763 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 ANKRD54Q6NXT1 300 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 CENPLQ8N0S6 344 aaPredicted RBP9.15□□□□□ -0.94
BDNF-201ENST00000314915 CPXCR1Q8N123 301 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 ATG4AQ8WYN0 398 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 LRFN5Q96NI6 719 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 KCNA7Q96RP8 456 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 ALOXE3Q9BYJ1 711 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 ZNF436Q9C0F3 470 aaPredicted RBP9.15□□□□□ -0.94
BDNF-201ENST00000314915 CARS2Q9HA77 564 aaKnown RBP9.15□□□□□ -0.94
BDNF-201ENST00000314915 AGPAT4Q9NRZ5 378 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 XPR1Q9UBH6 696 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 POM121BA6NF01 834 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 USP17L5A8MUK1 530 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 USP17L15C9J2P7 530 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 USP17L12C9JPN9 530 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 USP17L11C9JVI0 530 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 USP17L21D6R901 530 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 USP17L18D6R9N7 530 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 USP17L22D6RA61 530 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 USP17L19D6RCP7 530 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 USP17L20D6RJB6 530 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 SERPINE1P05121 402 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 CTSHP09668 335 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 HNMTP50135 292 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 NR0B1P51843 470 aaKnown RBP9.15□□□□□ -0.94
BDNF-201ENST00000314915 USP17L24Q0WX57 530 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 SNTB1Q13884 538 aaKnown RBP9.15□□□□□ -0.94
BDNF-201ENST00000314915 MICBQ29980 383 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 C6orf141Q5SZD1 244 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 TMC8Q8IU68 726 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 PSTKQ8IV42 348 aaKnown RBP9.15□□□□□ -0.94
BDNF-201ENST00000314915 TRIM48Q8IWZ4 208 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 PPIL6Q8IXY8 311 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 NIPA2Q8N8Q9 360 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 ZNF669Q96BR6 464 aaPredicted RBP9.15□□□□□ -0.94
BDNF-201ENST00000314915 MUS81Q96NY9 551 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 STRA6Q9BX79 667 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 CEP41Q9BYV8 373 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 ALG5Q9Y673 324 aa9.15□□□□□ -0.94
BDNF-201ENST00000314915 AQP12BA6NM10 295 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 EI24O14681 340 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 MMP20O60882 483 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 PAPSS2O95340 614 aaPredicted RBP9.15□□□□□ -0.95
BDNF-201ENST00000314915 C9P02748 559 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 MLNP12872 115 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 ADORA1P30542 326 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 NUMBP49757 651 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 ANKRD22Q5VYY1 191 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 CYB5R2Q6BCY4 276 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 AQP12AQ8IXF9 295 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 PPM1NQ8N819 430 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 OR2L5Q8NG80 312 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 NSMCE2Q96MF7 247 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 SLC30A2Q9BRI3 323 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 C2orf88Q9BSF0 95 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 KRT84Q9NSB2 600 aa9.15□□□□□ -0.95
BDNF-201ENST00000314915 TBC1D13Q9NVG8 400 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms