RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 PCDH1Q08174 1060 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 RUNX3Q13761 415 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 NFYCQ13952 458 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 RAB30Q15771 203 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 ZNF658BQ4V348 819 aaPredicted RBP18.96■□□□□ 0.63
HOXC4-201ENST00000303406 SYTL3Q4VX76 610 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 IL23RQ5VWK5 629 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 TANGO2Q6ICL3 276 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 SPATA24Q86W54 205 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 FAM9CQ8IZT9 166 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 PLCD3Q8N3E9 789 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 FBXO15Q8NCQ5 510 aaPredicted RBP18.96■□□□□ 0.63
HOXC4-201ENST00000303406 SKA2Q8WVK7 121 aaPredicted RBP18.96■□□□□ 0.63
HOXC4-201ENST00000303406 TMEM159Q96B96 161 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 NUS1Q96E22 293 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 TEX37Q96LM6 180 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 P2RY13Q9BPV8 354 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 CERS4Q9HA82 394 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 DYRK4Q9NR20 520 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 RIMS3Q9UJD0 308 aa18.96■□□□□ 0.63
HOXC4-201ENST00000303406 ZNF490Q9ULM2 529 aaPredicted RBP18.96■□□□□ 0.63
HOXC4-201ENST00000303406 CNOT6Q9ULM6 557 aaKnown RBP18.96■□□□□ 0.63
HOXC4-201ENST00000303406 AQP12BA6NM10 295 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 TSPAN6O43657 245 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 SOD1P00441 154 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 CATP04040 527 aaKnown RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 G6PDP11413 515 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 HLA-EP13747 358 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 PBX2P40425 430 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 CTSCP53634 463 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 EEFSECP57772 596 aaKnown RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 TRIP10Q15642 601 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 PTCHD3Q3KNS1 767 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 POM121L1PQ3SYA9 428 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 ERN2Q76MJ5 926 aaKnown RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 AQP12AQ8IXF9 295 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 SLC22A15Q8IZD6 547 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 ADCY4Q8NFM4 1077 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 SUSD6Q92537 303 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 ZNF514Q96K75 400 aaPredicted RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 LRGUKQ96M69 825 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 CCDC138Q96M89 665 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 PBX4Q9BYU1 374 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 ACTL8Q9H568 366 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 LRTM1Q9HBL6 345 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 CMTM6Q9NX76 183 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 MSRAQ9UJ68 235 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 ITM2BQ9Y287 266 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 POLR3HQ9Y535 204 aaPredicted RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 OR2AG2A6NM03 316 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 DNAJA2O60884 412 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 RSL1D1O76021 490 aaKnown RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 TCN1P20061 433 aaPredicted RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 MAP4P27816 1152 aaKnown RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 GJA4P35212 333 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 MSX2P35548 267 aaPredicted RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 MAGEA10P43363 369 aaPredicted RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 PLOD1Q02809 727 aaPredicted RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 IMPG1Q17R60 797 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 ZXDCQ2QGD7 858 aaPredicted RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 RFTN2Q52LD8 501 aaPredicted RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 CACHD1Q5VU97 1274 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 ANKRD54Q6NXT1 300 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 TMEM220Q6QAJ8 160 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 DHFR2Q86XF0 187 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 FAM156AQ8NDB6 213 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 TMEM125Q96AQ2 219 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 MRPL38Q96DV4 380 aaKnown RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 LINC00615Q96LM1 132 aaPredicted RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 BTBD9Q96Q07 612 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 ZBTB18Q99592 522 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 WRAP53Q9BUR4 548 aaKnown RBP18.95■□□□□ 0.62
HOXC4-201ENST00000303406 NKX2-4Q9H2Z4 354 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 C1orf109Q9NX04 203 aa18.95■□□□□ 0.62
HOXC4-201ENST00000303406 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.94■□□□□ 0.62
HOXC4-201ENST00000303406 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.94■□□□□ 0.62
HOXC4-201ENST00000303406 TBC1D3BA6NDS4 549 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 RECQL5O94762 991 aaPredicted RBP18.94■□□□□ 0.62
HOXC4-201ENST00000303406 C6P13671 934 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 SLC2A4P14672 509 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 VARSP26640 1264 aaKnown RBP18.94■□□□□ 0.62
HOXC4-201ENST00000303406 PEX2P28328 305 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 SLC7A1P30825 629 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 RPL38P63173 70 aaKnown RBP18.94■□□□□ 0.62
HOXC4-201ENST00000303406 KLC1Q07866 573 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 BLMHQ13867 455 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 KIAA0040Q15053 153 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 PAGE3Q5JUK9 113 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 FAM46CQ5VWP2 391 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 LIPJQ5W064 366 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 PPP2R2DQ66LE6 453 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 LCN8Q6JVE9 175 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 NEK5Q6P3R8 708 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 NUDT18Q6ZVK8 323 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 PTRH1Q86Y79 214 aaKnown RBP18.94■□□□□ 0.62
HOXC4-201ENST00000303406 YAF2Q8IY57 180 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 RGL4Q8IZJ4 473 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 BEND7Q8N7W2 519 aaPredicted RBP18.94■□□□□ 0.62
HOXC4-201ENST00000303406 N4BP2L2Q92802 583 aaPredicted RBP18.94■□□□□ 0.62
HOXC4-201ENST00000303406 FOPNLQ96NB1 174 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms