RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 YY2O15391 372 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 ZNF432O94892 652 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 MYLK3Q32MK0 819 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 TWNKQ96RR1 684 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 IFT27Q9BW83 186 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 IRF2BPLQ9H1B7 796 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 STOX2Q9P2F5 926 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 RHCGQ9UBD6 479 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 IFNGP01579 166 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 AOC1P19801 751 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 VIPR1P32241 457 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 SOX9P48436 509 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 NFKB2Q00653 900 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 ABHD13Q7L211 337 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 THAP5Q7Z6K1 395 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 PSMA8Q8TAA3 256 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 TMEM125Q96AQ2 219 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 CLCC1Q96S66 551 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 FBRSQ9HAH7 460 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 RAP2CQ9Y3L5 183 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 HS3ST4Q9Y661 456 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 IGLV3-22A0A075B6J6 115 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.65□□□□□ -1.18
SCN9A-201ENST00000303354 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.65□□□□□ -1.18
SCN9A-201ENST00000303354 BLOC1S5-TXNDC5H3BN57 136 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 OAZ2O95190 189 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 GALTP07902 379 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 EDN3P14138 238 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 REP15Q6BDI9 236 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 DTX3Q8N9I9 347 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 OR10H4Q8NGA5 316 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 HEXDCQ8WVB3 486 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 B3GNT4Q9C0J1 378 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 EIF2B3Q9NR50 452 aaKnown RBP7.65□□□□□ -1.18
SCN9A-201ENST00000303354 RNGTTO60942 597 aaKnown RBP7.65□□□□□ -1.18
SCN9A-201ENST00000303354 SMARCB1Q12824 385 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 TXNRD3NBQ6F5E7 133 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 CEP44Q9C0F1 390 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 MAGEH1Q9H213 219 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 KCNH6Q9H252 994 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 HCSTQ9UBK5 93 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 COCHO43405 550 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 PLATP00750 562 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 ANPEPP15144 967 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 KCNC4Q03721 635 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 SLC34A1Q06495 639 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 ZNF792Q3KQV3 632 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 ZNF776Q68DI1 518 aaPredicted RBP7.65□□□□□ -1.18
SCN9A-201ENST00000303354 PEX5LQ8IYB4 626 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 FAM3CQ92520 227 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 IL17FQ96PD4 163 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 OR51B5Q9H339 312 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 ADGRA3Q8IWK6 1321 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 IGLON5A6NGN9 336 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 SNUPNO95149 360 aaKnown RBP7.65□□□□□ -1.18
SCN9A-201ENST00000303354 GLDCP23378 1020 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 SLC1A2P43004 574 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 PRKAA2P54646 552 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 KIAA1161Q6NSJ0 714 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 NUP54Q7Z3B4 507 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 C14orf80Q86SX3 495 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 LRRTM4Q86VH4 590 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 C4orf32Q8N8J7 132 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 ZBTB8BQ8NAP8 495 aaPredicted RBP7.65□□□□□ -1.18
SCN9A-201ENST00000303354 PLEKHG4BQ96PX9 1271 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 ERGIC3Q9Y282 383 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 MYRFQ9Y2G1 1151 aa7.65□□□□□ -1.18
SCN9A-201ENST00000303354 ELOA3DA6NLF2 546 aaPredicted RBP7.65□□□□□ -1.19
SCN9A-201ENST00000303354 HSD11B1P28845 292 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 ELOA3BQ3SY89 546 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 MZT2AQ6P582 158 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 ATG14Q6ZNE5 492 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 AMIGO1Q86WK6 493 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 OR4N5Q8IXE1 308 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 NXPE1Q8N323 547 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF781Q8N8C0 355 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 GSTCDQ8NEC7 633 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 ELOA3Q8NG57 546 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 KIAA1143Q96AT1 154 aaPredicted RBP7.65□□□□□ -1.19
SCN9A-201ENST00000303354 FEM1AQ9BSK4 669 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 SESN1Q9Y6P5 492 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 MTMR11A4FU01 709 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 CPNE3O75131 537 aaKnown RBP7.65□□□□□ -1.19
SCN9A-201ENST00000303354 DIRAS1O95057 198 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 ETV3P41162 512 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 MAN2A2P49641 1150 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 IL18Q14116 193 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 PAQR3Q6TCH7 311 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 CAND1Q86VP6 1230 aaKnown RBP7.65□□□□□ -1.19
SCN9A-201ENST00000303354 DSN1Q9H410 356 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 XPNPEP1Q9NQW7 623 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 MRGBPQ9NV56 204 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 LEFTY1O75610 366 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 IQCF3P0C7M6 154 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 ITGB8P26012 769 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF135P52742 658 aaPredicted RBP7.65□□□□□ -1.19
SCN9A-201ENST00000303354 LGALS3BPQ08380 585 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF267Q14586 743 aaPredicted RBP7.65□□□□□ -1.19
SCN9A-201ENST00000303354 PDK4Q16654 411 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 EXOC3L2Q2M3D2 409 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms