RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 SLC35F1Q5T1Q4 408 aa12.16□□□□□ -0.46
ABCA3-201ENST00000301732 CAPN13Q6MZZ7 669 aaPredicted RBP12.16□□□□□ -0.46
ABCA3-201ENST00000301732 FAM92BQ6ZTR7 304 aa12.16□□□□□ -0.46
ABCA3-201ENST00000301732 MARCH9Q86YJ5 346 aa12.16□□□□□ -0.46
ABCA3-201ENST00000301732 OR13C4Q8NGS5 318 aa12.16□□□□□ -0.46
ABCA3-201ENST00000301732 SEC14L1Q92503 715 aa12.16□□□□□ -0.46
ABCA3-201ENST00000301732 UBE2E3Q969T4 207 aa12.16□□□□□ -0.46
ABCA3-201ENST00000301732 KCNA7Q96RP8 456 aa12.16□□□□□ -0.46
ABCA3-201ENST00000301732 AIFM2Q9BRQ8 373 aa12.16□□□□□ -0.46
ABCA3-201ENST00000301732 ZNF649Q9BS31 505 aa12.16□□□□□ -0.46
ABCA3-201ENST00000301732 ASPNQ9BXN1 380 aa12.16□□□□□ -0.46
ABCA3-201ENST00000301732 C14orf105Q9NVL8 296 aa12.16□□□□□ -0.46
ABCA3-201ENST00000301732 ELOA3DA6NLF2 546 aaPredicted RBP12.15□□□□□ -0.46
ABCA3-201ENST00000301732 LRCH4O75427 683 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 CDRT1O95170 752 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 CSTF2P33240 577 aaKnown RBP eCLIP12.15□□□□□ -0.46
ABCA3-201ENST00000301732 ELOA3BQ3SY89 546 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 APOBEC3HQ6NTF7 200 aaKnown RBP12.15□□□□□ -0.46
ABCA3-201ENST00000301732 PEX5LQ8IYB4 626 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 PHTF2Q8N3S3 785 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 ELOA3Q8NG57 546 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 TAS2R1Q9NYW7 299 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 PTBP2Q9UKA9 531 aaKnown RBP12.15□□□□□ -0.46
ABCA3-201ENST00000301732 MSX1P28360 303 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 SLC1A2P43004 574 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 RORCP51449 518 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 SNRPD2P62316 118 aaKnown RBP12.15□□□□□ -0.46
ABCA3-201ENST00000301732 GTF2BQ00403 316 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 PPIL2Q13356 520 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 ARFRP1Q13795 201 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 AMZ1Q400G9 498 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 FAM237AA0A1B0GTK4 181 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 XYLBO75191 536 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 ADH7P40394 386 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 FOXM1Q08050 763 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 TUSC3Q13454 348 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 TEX44Q53QW1 395 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 BRMS1LQ5PSV4 323 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 ZNF648Q5T619 568 aaPredicted RBP12.15□□□□□ -0.46
ABCA3-201ENST00000301732 SPATA19Q7Z5L4 167 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 SERPINA9Q86WD7 417 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 DEFB119Q8N690 84 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 TM9SF2Q99805 663 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 ZNF471Q9BX82 626 aaPredicted RBP12.15□□□□□ -0.46
ABCA3-201ENST00000301732 KCNMB3Q9NPA1 279 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 PRDM8Q9NQV8 689 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 TMEM5Q9Y2B1 443 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 TMEM88BA6NKF7 163 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 IRF6O14896 467 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 CDKN1CP49918 316 aaPredicted RBP12.15□□□□□ -0.46
ABCA3-201ENST00000301732 SLC26A2P50443 739 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 FXYD6P3P58550 94 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 ZNF548Q8NEK5 533 aaPredicted RBP12.15□□□□□ -0.46
ABCA3-201ENST00000301732 C17orf50Q8WW18 174 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 AKAP1Q92667 903 aaKnown RBP eCLIP12.15□□□□□ -0.46
ABCA3-201ENST00000301732 ZSWIM3Q96MP5 696 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 SMURF2Q9HAU4 748 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 KCTD5Q9NXV2 234 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 GPN3Q9UHW5 284 aaPredicted RBP12.15□□□□□ -0.46
ABCA3-201ENST00000301732 ATXN7L1Q9ULK2 861 aaPredicted RBP12.15□□□□□ -0.46
ABCA3-201ENST00000301732 PNPLA6Q8IY17 1366 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 SPATA31A1Q5TZJ5 1347 aa12.15□□□□□ -0.46
ABCA3-201ENST00000301732 STK16O75716 305 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 WFS1O76024 890 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 EDNRAP25101 427 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 GDF5P43026 501 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 OR1E2P47887 323 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 CLCNKBP51801 687 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 GRK1Q15835 563 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 ABCA11PQ4W5N1 156 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 LRRC70Q7Z2Q7 622 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 EGFL6Q8IUX8 553 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 CEP97Q8IW35 865 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 ACMSDQ8TDX5 336 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 SLC7A6OSQ96CW6 309 aaPredicted RBP12.15□□□□□ -0.47
ABCA3-201ENST00000301732 CPNE2Q96FN4 548 aaPredicted RBP12.15□□□□□ -0.47
ABCA3-201ENST00000301732 C7orf34Q96L11 122 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 C1QTNF7Q9BXJ2 289 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 DUSP16Q9BY84 665 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 HIPK3Q9H422 1215 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 KAT8Q9H7Z6 458 aaKnown RBP12.15□□□□□ -0.47
ABCA3-201ENST00000301732 ADAP2Q9NPF8 381 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 AJAP1Q9UKB5 411 aaPredicted RBP12.15□□□□□ -0.47
ABCA3-201ENST00000301732 CDH7Q9ULB5 785 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 CPS1P31327 1500 aa12.15□□□□□ -0.47
ABCA3-201ENST00000301732 MBD5Q9P267 1494 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 ZNF705EA8MWA4 302 aaPredicted RBP12.14□□□□□ -0.47
ABCA3-201ENST00000301732 EPHX1P07099 455 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 CFHP08603 1231 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 ITGB5P18084 799 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 C9orf57Q5W0N0 161 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 FAM217AQ8IXS0 508 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 C1orf216Q8TAB5 229 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 GPR151Q8TDV0 419 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 PNO1Q9NRX1 252 aaKnown RBP12.14□□□□□ -0.47
ABCA3-201ENST00000301732 DPP7Q9UHL4 492 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 ZNF225Q9UK10 706 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 TMCO1Q9UM00 188 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 NDRG2Q9UN36 371 aaKnown RBP12.14□□□□□ -0.47
ABCA3-201ENST00000301732 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms