RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 SIX1Q15475 284 aaPredicted RBP13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 ZNF789Q5FWF6 425 aa13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 PRAMEF17Q5VTA0 474 aa13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 ZNF534Q76KX8 674 aa13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 PRUNE1Q86TP1 453 aa13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 GLIS1Q8NBF1 620 aa13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 ASZ1Q8WWH4 475 aa13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 DPH2Q9BQC3 489 aaPredicted RBP13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 CARD6Q9BX69 1037 aa13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 NLNQ9BYT8 704 aa13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 SLC7A5P2Q9GIP4 190 aa13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 CHRNA10Q9GZZ6 450 aa13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 EPN3Q9H201 632 aa13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 LZTFL1Q9NQ48 299 aa13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 EIF2B3Q9NR50 452 aaKnown RBP13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 TLK1Q9UKI8 766 aa13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 TP53TG5Q9Y2B4 290 aa13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 TDRKHQ9Y2W6 561 aaKnown RBP13.43□□□□□ -0.26
TMEM41B-201ENST00000299596 MYO18BQ8IUG5 2567 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 CHRM5P08912 532 aaPredicted RBP13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 ZSCAN5DPP0CG00 497 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 PVRP15151 417 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 UGT2B7P16662 529 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 CCR7P32248 378 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 NPY2RP49146 381 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 TTPAP49638 278 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 RPS18P62269 152 aaKnown RBP13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 DNAJC21Q5F1R6 531 aaKnown RBP13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 NAPRTQ6XQN6 538 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 CDHR3Q6ZTQ4 885 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 GSTA5Q7RTV2 222 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 GPR135Q8IZ08 494 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 SLC22A15Q8IZD6 547 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 C19orf47Q8N9M1 422 aaKnown RBP13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 TRIM58Q8NG06 486 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 N4BP2L2Q92802 583 aaPredicted RBP13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 OR2A14Q96R47 310 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 AP1M1Q9BXS5 423 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 IL22Q9GZX6 179 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 KLHL25Q9H0H3 589 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 CHRAC1Q9NRG0 131 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 HOMER3Q9NSC5 361 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 CATSPERZQ9NTU4 200 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 PCMTD2Q9NV79 361 aa13.42□□□□□ -0.26
TMEM41B-201ENST00000299596 UBR5O95071 2799 aaPredicted RBP13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 CD3EAPO15446 510 aaKnown RBP13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 ZNF749O43361 778 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 GPC4O75487 556 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 FGGP02679 453 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 RPN2P04844 631 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 APOA4P06727 396 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 TPBGLP0DKB5 382 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 AGXTP21549 392 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 SESN2P58004 480 aaPredicted RBP13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 HSPA14Q0VDF9 509 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 KIR2DS3Q14952 304 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 ASB18Q6ZVZ8 466 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 SYTL1Q8IYJ3 562 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 ENDOVQ8N8Q3 282 aaKnown RBP13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 TEX19Q8NA77 164 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 C17orf62Q9BQA9 187 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 BFARQ9NZS9 450 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 TCFL5Q9UL49 500 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 SNX7Q9UNH6 387 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 AP1M2Q9Y6Q5 423 aa13.41□□□□□ -0.26
TMEM41B-201ENST00000299596 A0A0J9YY10 115 aa13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 PRMT5O14744 637 aaPredicted RBP13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 RAB28P51157 221 aa13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 CSE1LP55060 971 aaKnown RBP13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 BASP1P80723 227 aaKnown RBP13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 CDK16Q00536 496 aa13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 IL10RAQ13651 578 aa13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 SEMA3AQ14563 771 aa13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 SLC5A12Q1EHB4 618 aa13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 LCN10Q6JVE6 187 aa13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 LRRC8AQ8IWT6 810 aa13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 MPP5Q8N3R9 675 aa13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 FAM60AQ9NP50 221 aa13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 ACSS2Q9NR19 701 aa13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 TREX1Q9NSU2 369 aa13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 SPHK1Q9NYA1 384 aa13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 CDYLQ9Y232 598 aa13.4□□□□□ -0.26
TMEM41B-201ENST00000299596 ISM1B1AKI9 464 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 C9J4A7 227 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 K7EM74 188 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 KPNA5O15131 536 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 CEP104O60308 925 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 OR2B3O76000 313 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 SLCO2B1O94956 709 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 CAPN1P07384 714 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 CD63P08962 238 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 AOAHP28039 575 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 TMED2Q15363 201 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 ZIC1Q15915 447 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 KYNUQ16719 465 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 PTRHD1Q6GMV3 140 aaKnown RBP13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 UNC5DQ6UXZ4 953 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 LDB1Q86U70 411 aaPredicted RBP13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 TRIM73Q86UV7 250 aa13.39□□□□□ -0.27
TMEM41B-201ENST00000299596 LRRC6Q86X45 466 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms