RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 NKG7Q16617 165 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 DGUOKQ16854 277 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 GATAD2AQ86YP4 633 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 KCNC2Q96PR1 638 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 GNPTGQ9UJJ9 305 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 OGDHLQ9ULD0 1010 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 HTR3EA5X5Y0 456 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 ZNF99A8MXY4 864 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 B4GALT3O60512 393 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 OTCP00480 354 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 EPB42P16452 691 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 HPCAL1P37235 193 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 RPS3AP61247 264 aaKnown RBP13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 PLD1Q13393 1074 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 CTU2Q2VPK5 515 aaKnown RBP13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 NIPAL1Q6NVV3 410 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 TXNDC11Q6PKC3 985 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 CCDC117Q8IWD4 279 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 SPATA17Q96L03 361 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 CSF3RQ99062 836 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 RAPGEFL1Q9UHV5 662 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 SDK1Q7Z5N4 2213 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 CREG1O75629 220 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 MT-ND2P03891 347 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 HIST1H2AGP0C0S8 130 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 GSTT2P0CG29 244 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 GSTT2BP0CG30 244 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 CD36P16671 472 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 HIST1H2ADP20671 130 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 CRHBPP24387 322 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 EPHA2P29317 976 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 GRB14Q14449 540 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 ZNF846Q147U1 533 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 SOWAHCQ53LP3 525 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 RGL4Q8IZJ4 473 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 UMODL1-AS1Q8N2C9 162 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 MAGED4Q96JG8 741 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 HIST1H2AHQ96KK5 128 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 HIST1H2AJQ99878 128 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 MCMBPQ9BTE3 642 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 H2AFJQ9BTM1 129 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 FAM126AQ9BYI3 521 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 AMBRA1Q9C0C7 1298 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 NDEL1Q9GZM8 345 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 KATNBL1Q9H079 304 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 KRT84Q9NSB2 600 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 GIN1Q9NXP7 522 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 DNAJB9Q9UBS3 223 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 GNG14A0A1W2PPG7 69 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 SLC1A7O00341 560 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 DNTTP04053 509 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 ASGR1P07306 291 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 UMPSP11172 480 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 DCKP27707 260 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 RSBN1Q5VWQ0 802 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 LMNTD1Q8N9Z9 388 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 RBM4BQ9BQ04 359 aaKnown RBP13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 RBM4Q9BWF3 364 aaKnown RBP13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 DERL2Q9GZP9 239 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 ERGIC3Q9Y282 383 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 CAB39Q9Y376 341 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 TMEM221A6NGB7 291 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 EEDO75530 441 aaKnown RBP13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 WDR47O94967 919 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 ALPLP05186 524 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 ELNP15502 786 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 ZNF7P17097 686 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 CORO1AP31146 461 aaKnown RBP13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 RCVRNP35243 200 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 ATP5C1P36542 298 aaKnown RBP13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 EMX2Q04743 252 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 FAM110CQ1W6H9 321 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 TMEM179BQ7Z7N9 219 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 ZFAND4Q86XD8 727 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 SYT12Q8IV01 421 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 CHDHQ8NE62 594 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 PROX1Q92786 737 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 DMRTB1Q96MA1 342 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 IMPAD1Q9NX62 359 aa13.04□□□□□ -0.32
TNFRSF21-201ENST00000296861 ANKRD66B4E2M5 251 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 LSM1O15116 133 aaKnown RBP13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 CLDN7O95471 211 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 C1QCP02747 245 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 S100A5P33763 92 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 SOAT1P35610 550 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 OR1E2P47887 323 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 TRAF3Q13114 568 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 CBLBQ13191 982 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 PON2Q15165 354 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 HACD2Q6Y1H2 254 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 C2orf73Q8N5S3 287 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 TTC29Q8NA56 475 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 TANKQ92844 425 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 NEURL2Q9BR09 285 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 TSEN34Q9BSV6 310 aaKnown RBP13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 MRM3Q9HC36 420 aaKnown RBP13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 TBL1XO60907 577 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 FGF4P08620 206 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 COX7A2P14406 83 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 AKR1A1P14550 325 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms