RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 LCN1P1Q5VSP4 162 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 ZC3H14Q6PJT7 736 aaKnown RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 ADGRG6Q86SQ4 1221 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 ZC3H7AQ8IWR0 971 aaKnown RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 SLC7A5P1Q8MH63 180 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 KRT78Q8N1N4 520 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 ZNF420Q8TAQ5 688 aaPredicted RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 EXOC2Q96KP1 924 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 KIFC1Q9BW19 673 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 DCSTAMPQ9H295 470 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 OPTCQ9UBM4 332 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 MLXQ9UH92 298 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 MFHAS1Q9Y4C4 1052 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 STON1Q9Y6Q2 735 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 LRRC37AA6NMS7 1700 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 KLF11O14901 512 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 TP73O15350 636 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 IPO13O94829 963 aaKnown RBP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 MLYCDO95822 493 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 ITGB1P05556 798 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 GSTT2P0CG29 244 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 GSTT2BP0CG30 244 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 TYRP14679 529 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 EPCAMP16422 314 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 MPP1Q00013 466 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 HSF2Q03933 536 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 DSC3Q14574 896 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 SUZ12Q15022 739 aaKnown RBP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 FBXO43Q4G163 708 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 DRICH1Q6PGQ1 229 aaPredicted RBP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 PTCHD4Q6ZW05 846 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 PACRGLQ8N7B6 248 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 P2RY11Q96G91 374 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 TRNT1Q96Q11 434 aaKnown RBP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 KCTD15Q96SI1 283 aaPredicted RBP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 GSDMCQ9BYG8 508 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 CRISPLD2Q9H0B8 497 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 EXD2Q9NVH0 621 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 NFKBIL1Q9UBC1 381 aaPredicted RBP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 EVLQ9UI08 416 aaPredicted RBP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 NOCTQ9UK39 431 aaKnown RBP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 VPS4AQ9UN37 437 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 COL4A5P29400 1685 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 COX7A2P14406 83 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 TPSB2P20231 275 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 ECHS1P30084 290 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 IL2P60568 153 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 RHAGQ02094 409 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 TPSAB1Q15661 275 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 ALFQ53S48 1182 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 CARD16Q5EG05 197 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 ZYG11AQ6WRX3 759 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 MACC1Q6ZN28 852 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 GPRIN3Q6ZVF9 776 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 ZNF655Q8N720 491 aaPredicted RBP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 PHF10Q8WUB8 498 aaKnown RBP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 PPP3R2Q96LZ3 170 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 MIEF1Q9NQG6 463 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 POLE4Q9NR33 117 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 ZNF358Q9NW07 568 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 HSFX1Q9UBD0 423 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 GTF2A1LQ9UNN4 478 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 FAM172BPA6NC97 362 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 RFPL2O75678 378 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 TBX18O95935 607 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 C9P02748 559 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 CD48P09326 243 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 ZNF806P0C7X5 589 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 CSKP41240 450 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 C1orf53Q5VUE5 145 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 ROPN1LQ96C74 230 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 OR52E6Q96RD3 313 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 KATNBL1Q9H079 304 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 OSBPL2Q9H1P3 480 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 NCDNQ9UBB6 729 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 FZD10Q9ULW2 581 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 DDX60LQ5H9U9 1706 aaKnown RBP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 A8MV72 311 aaPredicted RBP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 ORC5O43913 435 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 LATS1O95835 1130 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 CDH1P12830 882 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 EPB42P16452 691 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 CRATP43155 626 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 SLC15A1P46059 708 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 TTPAP49638 278 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 LIMK2P53671 638 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 RHDQ02161 417 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 GBE1Q04446 702 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 PGBD2Q6P3X8 592 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 CHST15Q7LFX5 561 aaPredicted RBP11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 CYP2U1Q7Z449 544 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 PLD5Q8N7P1 536 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 SLC35F5Q8WV83 523 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 SELENOMQ8WWX9 145 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 RETREG1Q9H6L5 497 aa11.17□□□□□ -0.62
NPC1L1-201ENST00000289547 A0A0G2JPF8 293 aa11.16□□□□□ -0.62
NPC1L1-201ENST00000289547 AQP12BA6NM10 295 aa11.16□□□□□ -0.62
NPC1L1-201ENST00000289547 HNRNPCL3B7ZW38 293 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms