RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PSPC1Q8WXF1 523 aaKnown RBP4.51□□□□□ -1.69
CD44-202ENST00000278385 RAB40AQ8WXH6 277 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 CNOT9Q92600 299 aaKnown RBP4.51□□□□□ -1.69
CD44-202ENST00000278385 GTF3C6Q969F1 213 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 TMIGD2Q96BF3 282 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 LRRC39Q96DD0 335 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 ELMOD3Q96FG2 381 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 ZNF668Q96K58 619 aaPredicted RBP4.51□□□□□ -1.69
CD44-202ENST00000278385 EIF3CQ99613 913 aaKnown RBP4.51□□□□□ -1.69
CD44-202ENST00000278385 SH3GL1Q99961 368 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 MTG1Q9BT17 334 aaPredicted RBP4.51□□□□□ -1.69
CD44-202ENST00000278385 INPP5KQ9BT40 448 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 MMTAG2Q9BU76 263 aaKnown RBP4.51□□□□□ -1.69
CD44-202ENST00000278385 TBC1D10AQ9BXI6 508 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 CLPBQ9H078 707 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 NUAK2Q9H093 628 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 TMPRSS5Q9H3S3 457 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 GOLPH3LQ9H4A5 285 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 PDZD7Q9H5P4 517 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 PIH1D3Q9NQM4 214 aaKnown RBP4.51□□□□□ -1.69
CD44-202ENST00000278385 PNPLA3Q9NST1 481 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 SETD4Q9NVD3 440 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 TBC1D13Q9NVG8 400 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 THAP1Q9NVV9 213 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 JKAMPQ9P055 326 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 TBC1D7Q9P0N9 293 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 KCNN3Q9UGI6 736 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 SLC45A2Q9UMX9 530 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 MRPS7Q9Y2R9 242 aaKnown RBP4.51□□□□□ -1.69
CD44-202ENST00000278385 C15orf41Q9Y2V0 281 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 MRPS2Q9Y399 296 aaKnown RBP4.51□□□□□ -1.69
CD44-202ENST00000278385 RFX7Q2KHR2 1363 aa4.51□□□□□ -1.69
CD44-202ENST00000278385 KIAA1217Q5T5P2 1943 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 GSAPA4D1B5 854 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 GOLGA8OA6NCC3 632 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 WIPF3A6NGB9 483 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 C5orf52A6NGY3 159 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 SDR42E2A6NKP2 422 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 DRGXA6NNA5 263 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 ZNF879B4DU55 563 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 HSBP1L1C9JCN9 74 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 GOLGA8NF8WBI6 632 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 ST8SIA3O43173 380 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 CTIFO43310 598 aaKnown RBP4.5□□□□□ -1.69
CD44-202ENST00000278385 RGS10O43665 173 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 TACC1O75410 805 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 ERN1O75460 977 aaKnown RBP4.5□□□□□ -1.69
CD44-202ENST00000278385 SMC2O95347 1197 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 TRUB2O95900 331 aaKnown RBP4.5□□□□□ -1.69
CD44-202ENST00000278385 OTCP00480 354 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 KRT14P02533 472 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 CSF2P04141 144 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 RLN1P04808 185 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 IVLP07476 585 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 ASNSP08243 561 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 CALB2P22676 271 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 SLC6A4P31645 630 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 OTX2P32243 289 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 S100A5P33763 92 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 HTR7P34969 479 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 THBS4P35443 961 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 ALDH1A3P47895 512 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 CHN2P52757 468 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 MVDP53602 400 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 PTTG1IPP53801 180 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 RPL15P61313 204 aaKnown RBP4.5□□□□□ -1.69
CD44-202ENST00000278385 GAD2Q05329 585 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 HSPA14Q0VDF9 509 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 LCP2Q13094 533 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 SNTB2Q13425 540 aaKnown RBP4.5□□□□□ -1.69
CD44-202ENST00000278385 TSTA3Q13630 321 aaPredicted RBP4.5□□□□□ -1.69
CD44-202ENST00000278385 ZRSR1Q15695 479 aaKnown RBP4.5□□□□□ -1.69
CD44-202ENST00000278385 UGP2Q16851 508 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 P3H1Q32P28 736 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 MGAT5BQ3V5L5 792 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 CBWD6Q4V339 395 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 KLHL26Q53HC5 615 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 RUNDC3AQ59EK9 446 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 CBWD3Q5JTY5 395 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 SH2D4BQ5SQS7 431 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 AAGABQ6PD74 315 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 TSSK4Q6SA08 328 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 PPP1R32Q7Z5V6 425 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 CENPVQ7Z7K6 275 aaPredicted RBP4.5□□□□□ -1.69
CD44-202ENST00000278385 WDR5BQ86VZ2 330 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 MAPKAPK5Q8IW41 473 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 CCDC65Q8IXS2 484 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 RASGEF1AQ8N9B8 481 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 BHLHE23Q8NDY6 225 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 CFAP61Q8NHU2 1237 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 ACMSDQ8TDX5 336 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 LPGAT1Q92604 370 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 SCAMP4Q969E2 229 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 PPP2R3CQ969Q6 453 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 NT5C3BQ969T7 300 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 SLC41A2Q96JW4 573 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 IFT74Q96LB3 600 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 COQ10AQ96MF6 247 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 ZNF577Q9BSK1 485 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 SIK2Q9H0K1 926 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms