RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 HYAL2Q12891 473 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 PTGES3Q15185 160 aaKnown RBP11.26□□□□□ -0.61
USP53-201ENST00000274030 LACTB2Q53H82 288 aaPredicted RBP11.26□□□□□ -0.61
USP53-201ENST00000274030 POP5Q969H6 163 aaKnown RBP11.26□□□□□ -0.61
USP53-201ENST00000274030 C1QTNF1Q9BXJ1 281 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 PIGUQ9H490 435 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 MBD2Q9UBB5 411 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 RAB26Q9ULW5 256 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 TLR6Q9Y2C9 796 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 NPHS1O60500 1241 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 DDX6P26196 483 aaKnown RBP eCLIP11.26□□□□□ -0.61
USP53-201ENST00000274030 IL12BP29460 328 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 DGKEP52429 567 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 NFKB2Q00653 900 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 ENPP7Q6UWV6 458 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 LYSMD3Q7Z3D4 306 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 TDRPQ86YL5 185 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 ZZZ3Q8IYH5 903 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 HMGB4Q8WW32 186 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 CARS2Q9HA77 564 aaKnown RBP11.26□□□□□ -0.61
USP53-201ENST00000274030 TRNAU1APQ9NX07 287 aaKnown RBP11.26□□□□□ -0.61
USP53-201ENST00000274030 K7EPI3 171 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 PDPK1O15530 556 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 CHST10O43529 356 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 PCDH7O60245 1069 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 TRMUO75648 421 aaKnown RBP11.26□□□□□ -0.61
USP53-201ENST00000274030 DHFRP00374 187 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 TGFBR2P37173 567 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 NCBP2P52298 156 aaKnown RBP eCLIP11.26□□□□□ -0.616e-8■■■■■ 32.2
USP53-201ENST00000274030 WDR4P57081 412 aaKnown RBP11.26□□□□□ -0.61
USP53-201ENST00000274030 TLE2Q04725 743 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 CARD16Q5EG05 197 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 DCAF12L1Q5VU92 463 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 LAPTM4BQ86VI4 370 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 PHF12Q96QT6 1004 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 TMEM109Q9BVC6 243 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 CXorf21Q9HAI6 301 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 PPM1HQ9ULR3 514 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 RUVBL1Q9Y265 456 aaKnown RBP11.26□□□□□ -0.61
USP53-201ENST00000274030 MED31Q9Y3C7 131 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 IRGMA1A4Y4 181 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 OPN1SWP03999 348 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 CLUP10909 449 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 OGNP20774 298 aaKnown RBP11.26□□□□□ -0.61
USP53-201ENST00000274030 S100GP29377 79 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 ARHGAP1Q07960 439 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 LRRC32Q14392 662 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 LIN52Q52LA3 116 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 IFI44LQ53G44 452 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 SLC9A4Q6AI14 798 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 ZNF598Q86UK7 904 aaKnown RBP11.26□□□□□ -0.61
USP53-201ENST00000274030 AKAP14Q86UN6 197 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 OR4C6Q8NH72 309 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 IFT27Q9BW83 186 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 TAPBPLQ9BX59 468 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 SUV39H2Q9H5I1 410 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 ETAA1Q9NY74 926 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 COQ4Q9Y3A0 265 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 PMF1-BGLAPU3KQ54 211 aa11.26□□□□□ -0.61
USP53-201ENST00000274030 RPL10P27635 214 aaKnown RBP11.25□□□□□ -0.61
USP53-201ENST00000274030 ECT2LQ008S8 904 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 SIRPB2Q5JXA9 342 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 CLEC12AQ5QGZ9 265 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 Q6ZVU0 165 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 RPS27LQ71UM5 84 aaKnown RBP11.25□□□□□ -0.61
USP53-201ENST00000274030 SATL1Q86VE3 508 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 P2RY8Q86VZ1 359 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 OR6K6Q8NGW6 343 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 BRI3BPQ8WY22 251 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 FCRL5Q96RD9 977 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 HAPLN3Q96S86 360 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 EBF2Q9HAK2 575 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 PLEKHA1Q9HB21 404 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 PDE10AQ9Y233 779 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 ATRNL1Q5VV63 1379 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 PLK4O00444 970 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 PI15O43692 258 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 CCNKO75909 580 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 PGLSO95336 258 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 FMO3P31513 532 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 PUDPQ08623 228 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 KCTD8Q6ZWB6 473 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 RANBP3LQ86VV4 465 aaPredicted RBP11.25□□□□□ -0.61
USP53-201ENST00000274030 CLDN19Q8N6F1 224 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 NAT8LQ8N9F0 302 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 ROPN1LQ96C74 230 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 RIPOR3Q96MK2 946 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 ZNF304Q9HCX3 659 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 ZCCHC3Q9NUD5 404 aaKnown RBP11.25□□□□□ -0.61
USP53-201ENST00000274030 INTS10Q9NVR2 710 aaKnown RBP11.25□□□□□ -0.61
USP53-201ENST00000274030 CKMT2P17540 419 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 DGKQP52824 942 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 GRSF1Q12849 480 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP53-201ENST00000274030 SLBPQ14493 270 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP53-201ENST00000274030 CHRNA6Q15825 494 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 PPP2R2DQ66LE6 453 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 FBXO42Q6P3S6 717 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 FATE1Q969F0 183 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 GORASP1Q9BQQ3 440 aa11.25□□□□□ -0.61
USP53-201ENST00000274030 KCNN2Q9H2S1 579 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms