RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 ADH1BP00325 375 aa13.04□□□□□ -0.32
SMG9-201ENST00000270066 ATP1B2P14415 290 aaPredicted RBP13.04□□□□□ -0.32
SMG9-201ENST00000270066 PTX3P26022 381 aaPredicted RBP13.04□□□□□ -0.32
SMG9-201ENST00000270066 IL12AP29459 219 aa13.04□□□□□ -0.32
SMG9-201ENST00000270066 ALDH4A1P30038 563 aa13.04□□□□□ -0.32
SMG9-201ENST00000270066 CAPGP40121 348 aa13.04□□□□□ -0.32
SMG9-201ENST00000270066 OMPP47874 163 aa13.04□□□□□ -0.32
SMG9-201ENST00000270066 IDH3AP50213 366 aa13.04□□□□□ -0.32
SMG9-201ENST00000270066 C22orf39Q6P5X5 142 aa13.04□□□□□ -0.32
SMG9-201ENST00000270066 KLHL24Q6TFL4 600 aa13.04□□□□□ -0.32
SMG9-201ENST00000270066 Q6ZVU0 165 aa13.04□□□□□ -0.32
SMG9-201ENST00000270066 SERINC5Q86VE9 423 aa13.04□□□□□ -0.32
SMG9-201ENST00000270066 NUDT13Q86X67 352 aa13.04□□□□□ -0.32
SMG9-201ENST00000270066 ZNF296Q8WUU4 475 aaPredicted RBP13.04□□□□□ -0.32
SMG9-201ENST00000270066 TIMMDC1Q9NPL8 285 aa13.04□□□□□ -0.32
SMG9-201ENST00000270066 PRKCGP05129 697 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 CFIP05156 583 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 IMPDH1P20839 514 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 SLC25A11Q02978 314 aaKnown RBP13.03□□□□□ -0.32
SMG9-201ENST00000270066 VWA5B1Q5TIE3 1220 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 TRMT10BQ6PF06 316 aaKnown RBP13.03□□□□□ -0.32
SMG9-201ENST00000270066 ZNF572Q7Z3I7 529 aaPredicted RBP13.03□□□□□ -0.32
SMG9-201ENST00000270066 FBXO15Q8NCQ5 510 aaPredicted RBP13.03□□□□□ -0.32
SMG9-201ENST00000270066 RIIAD1A6NNX1 92 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 J3KR12 359 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 PITPNM1O00562 1244 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 SRP54P61011 504 aaKnown RBP13.03□□□□□ -0.32
SMG9-201ENST00000270066 GALNT2Q10471 571 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 ZNF846Q147U1 533 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 MED22Q15528 200 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 CHRNA6Q15825 494 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 FAM91A1Q658Y4 838 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 SLC9A4Q6AI14 798 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 POMZP3Q6PJE2 187 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 TPRG1Q6ZUI0 275 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 GALNT15Q8N3T1 639 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 COX18Q8N8Q8 333 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 C16orf70Q9BSU1 422 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 THUMPD1Q9NXG2 353 aaKnown RBP13.03□□□□□ -0.32
SMG9-201ENST00000270066 FESP07332 822 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 ATP5A1P25705 553 aaKnown RBP13.03□□□□□ -0.32
SMG9-201ENST00000270066 SLC26A3P40879 764 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 CCR10P46092 362 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 PLA2G16P53816 162 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 RHAGQ02094 409 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 LPGAT1Q92604 370 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 ARHGAP39Q9C0H5 1083 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 HSD3B7Q9H2F3 369 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 FBXL12Q9NXK8 326 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 GNEQ9Y223 722 aaKnown RBP13.03□□□□□ -0.32
SMG9-201ENST00000270066 PRORSD1PA6NEY8 169 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 MPZL2O60487 215 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 NADKO95544 446 aaPredicted RBP13.03□□□□□ -0.32
SMG9-201ENST00000270066 NFKB2Q00653 900 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 SERINC3Q13530 473 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 CNPY1Q3B7I2 92 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 PRAMEF14Q5SWL7 426 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 DDI2Q5TDH0 399 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 PRAMEF13Q5VWM6 474 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 PAOXQ6QHF9 649 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 AKAP14Q86UN6 197 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 NPY6RQ99463 290 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 GINS4Q9BRT9 223 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 RETREG1Q9H6L5 497 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 TELO2Q9Y4R8 837 aa13.03□□□□□ -0.32
SMG9-201ENST00000270066 LDOC1O95751 146 aaPredicted RBP13.02□□□□□ -0.32
SMG9-201ENST00000270066 GALTP07902 379 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 SRPRAP08240 638 aaKnown RBP13.02□□□□□ -0.32
SMG9-201ENST00000270066 HOXB2P14652 356 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 SEMG2Q02383 582 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 SNAPC1Q16533 368 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 UPP1Q16831 310 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 SLC51AQ86UW1 340 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 CMTM8Q8IZV2 173 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 SLC13A3Q8WWT9 602 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 DUSP26Q9BV47 211 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 IL1RAPQ9NPH3 570 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 TUBA8Q9NY65 449 aaPredicted RBP13.02□□□□□ -0.32
SMG9-201ENST00000270066 DGKBQ9Y6T7 804 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 U3KQV3 271 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 PCDH7O60245 1069 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 UGT1A9O60656 530 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 UGT1A6P19224 532 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 UGT1A1P22309 533 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 UGT1A4P22310 534 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 S100GP29377 79 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 UGT1A3P35503 534 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 MLLT3P42568 568 aaPredicted RBP13.02□□□□□ -0.32
SMG9-201ENST00000270066 ZNF783Q6ZMS7 281 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 ZMIZ2Q8NF64 920 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 PXYLP1Q8TE99 480 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 TRIB2Q92519 343 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 TUBGCP5Q96RT8 1024 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 UGT1A7Q9HAW7 530 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 UGT1A10Q9HAW8 530 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 UGT1A8Q9HAW9 530 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 SIRPGQ9P1W8 387 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 SIX4Q9UIU6 781 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 SNX7Q9UNH6 387 aa13.02□□□□□ -0.32
SMG9-201ENST00000270066 FAM234BA2RU67 622 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms