RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SPATS1Q496A3 300 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 FRG2Q64ET8 278 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 C22orf39Q6P5X5 142 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 CHMP1BQ7LBR1 199 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 OR9I1Q8NGQ6 314 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 ADAMTS15Q8TE58 950 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 MS4A4AQ96JQ5 239 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 FRG2BQ96QU4 278 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 CD320Q9NPF0 282 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 ITM2CQ9NQX7 267 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 NHSQ6T4R5 1651 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 OR1F1O43749 312 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 S1PR4O95977 384 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 ERVK-21P61565 698 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 RHDQ02161 417 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 AMZ2Q86W34 360 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 TIMMDC1Q9NPL8 285 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 INTS7Q9NVH2 962 aaKnown RBP16.4■□□□□ 0.22
PHRF1-201ENST00000264555 OR10H1Q9Y4A9 318 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 PAPPAQ13219 1627 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 CENPXA8MT69 81 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 CMPK1P30085 196 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 MAGEA6P43360 314 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 RASSF5Q8WWW0 418 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 EFCAB11Q9BUY7 163 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 ARHGAP39Q9C0H5 1083 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 MAGEE1Q9HCI5 957 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 LRRC42Q9Y546 428 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 SOCS5O75159 536 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 FAM20CQ8IXL6 584 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 CCM2Q9BSQ5 444 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 TTLL2Q9BWV7 592 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 ACTR3BQ9P1U1 418 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 STX11O75558 287 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 EBLN1P0CF75 366 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 CD1DP15813 335 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 FPGSQ05932 587 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 OR5K1Q8NHB7 308 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 VANGL1Q8TAA9 524 aaPredicted RBP16.4■□□□□ 0.22
PHRF1-201ENST00000264555 TMLHEQ9NVH6 421 aa16.4■□□□□ 0.22
PHRF1-201ENST00000264555 ASNA1O43681 348 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 PGLSO95336 258 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 HSD17B2P37059 387 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 UFM1P61960 85 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 MERTKQ12866 999 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 SEMA3AQ14563 771 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 CEP97Q8IW35 865 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 PIH1D2Q8WWB5 315 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 EHD3Q9NZN3 535 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 TMED5Q9Y3A6 229 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 PCDHGB3Q9Y5G1 929 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 ZNF840PA6NDX5 716 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 SNNO75324 88 aaPredicted RBP16.39■□□□□ 0.21
PHRF1-201ENST00000264555 ADH5P11766 374 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 IL4RP24394 825 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 EMX2Q04743 252 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 MED22Q15528 200 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 RGL4Q8IZJ4 473 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 ZC4H2Q9NQZ6 224 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 MRPS33Q9Y291 106 aaKnown RBP16.39■□□□□ 0.21
PHRF1-201ENST00000264555 FADS2P1A8MWK0 482 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 MANBAO00462 879 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 SOCS7O14512 581 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 MTX2O75431 263 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 FGF18O76093 207 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 ZBTB11O95625 1053 aaPredicted RBP16.39■□□□□ 0.21
PHRF1-201ENST00000264555 PTX3P26022 381 aaPredicted RBP16.39■□□□□ 0.21
PHRF1-201ENST00000264555 GSK3BP49841 420 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 PTPN5P54829 565 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 PDCD4Q53EL6 469 aaKnown RBP16.39■□□□□ 0.21
PHRF1-201ENST00000264555 KLHL35Q6PF15 583 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 FAM81AQ8TBF8 368 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 FEM1AQ9BSK4 669 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 TRIM43BA6NCK2 446 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 UPK3BL1B0FP48 263 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 LOC730098B7Z3J9 87 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 UPK3BL2E5RIL1 263 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 LEFTY2O00292 366 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 FADS2O95864 444 aaKnown RBP16.39■□□□□ 0.21
PHRF1-201ENST00000264555 NPPAP01160 153 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 CKMT2P17540 419 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 MTAPQ13126 283 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 ZNF846Q147U1 533 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 SATL1Q86VE3 508 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 CELF5Q8N6W0 485 aaKnown RBP16.39■□□□□ 0.21
PHRF1-201ENST00000264555 GIPC3Q8TF64 312 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 KCNA7Q96RP8 456 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 TUBGCP5Q96RT8 1024 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 NSUN3Q9H649 340 aaKnown RBP16.39■□□□□ 0.21
PHRF1-201ENST00000264555 SLC22A14Q9Y267 594 aa16.39■□□□□ 0.21
PHRF1-201ENST00000264555 hCG_2039718K7EN88 272 aa16.38■□□□□ 0.21
PHRF1-201ENST00000264555 EI24O14681 340 aa16.38■□□□□ 0.21
PHRF1-201ENST00000264555 PCDH7O60245 1069 aa16.38■□□□□ 0.21
PHRF1-201ENST00000264555 RPS6KA3P51812 740 aa16.38■□□□□ 0.21
PHRF1-201ENST00000264555 MTTPP55157 894 aa16.38■□□□□ 0.21
PHRF1-201ENST00000264555 ATP13A5Q4VNC0 1218 aa16.38■□□□□ 0.21
PHRF1-201ENST00000264555 CHST15Q7LFX5 561 aaPredicted RBP16.38■□□□□ 0.21
PHRF1-201ENST00000264555 LRRTM3Q86VH5 581 aa16.38■□□□□ 0.21
PHRF1-201ENST00000264555 HM13Q8TCT9 377 aa16.38■□□□□ 0.21
PHRF1-201ENST00000264555 ZNF778Q96MU6 729 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms