RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 FBXL8Q96CD0 374 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 SHDQ96IW2 340 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 NSL1Q96IY1 281 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 MARK4Q96L34 752 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 CCDC138Q96M89 665 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 CDK15Q96Q40 435 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 APOOQ9BUR5 198 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 DPEP2Q9H4A9 486 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 SLC32A1Q9H598 525 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 LMAN1LQ9HAT1 526 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 LTB4R2Q9NPC1 389 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 PFDN4Q9NQP4 134 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 KLC4Q9NSK0 619 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 USP36Q9P275 1121 aaKnown RBP8.1□□□□□ -1.11
COPS4-201ENST00000264389 GULP1Q9UBP9 304 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 TAGLN3Q9UI15 199 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 LNPEPQ9UIQ6 1025 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 MOSPD1Q9UJG1 213 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 ZNF225Q9UK10 706 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 BTRCQ9Y297 605 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 TIMM22Q9Y584 194 aa8.1□□□□□ -1.11
COPS4-201ENST00000264389 PCYT1BQ9Y5K3 369 aaPredicted RBP8.1□□□□□ -1.11
COPS4-201ENST00000264389 EYSQ5T1H1 3165 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 ATP6AP2A0A1C7CYW4 349 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 KLHL33A6NCF5 533 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 KRT87PA6NCN2 255 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 CFAP73A6NFT4 308 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 CHURC1-FNTBB4DL54 471 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 FPGTO14772 594 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 ATP6AP2O75787 350 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 CAPN1P07384 714 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 T-ENOLP0DO92 83 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 ACP5P13686 325 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 HGFP14210 728 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 EZRP15311 586 aaKnown RBP8.09□□□□□ -1.11
COPS4-201ENST00000264389 AOC1P19801 751 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 HNRNPA2B1P22626 353 aaKnown RBP8.09□□□□□ -1.11
COPS4-201ENST00000264389 GGT5P36269 586 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 KIAA1024LP59773 190 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 ZP2Q05996 745 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 RPA4Q13156 261 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 PTCHD3Q3KNS1 767 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 UGT3A2Q3SY77 523 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 ANO7Q6IWH7 933 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 LETMD1Q6P1Q0 360 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 UNC5DQ6UXZ4 953 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 FAM83HQ6ZRV2 1179 aaPredicted RBP8.09□□□□□ -1.11
COPS4-201ENST00000264389 MILR1Q7Z6M3 343 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 PDZD3Q86UT5 571 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 GALNT13Q8IUC8 556 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 CHCHD4Q8N4Q1 142 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 FBXO15Q8NCQ5 510 aaPredicted RBP8.09□□□□□ -1.11
COPS4-201ENST00000264389 TUBGCP3Q96CW5 907 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 PTCD3Q96EY7 689 aaKnown RBP8.09□□□□□ -1.11
COPS4-201ENST00000264389 TIMM29Q9BSF4 260 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 ATG10Q9H0Y0 220 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 LRMDAQ9H2I8 198 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 RMI1Q9H9A7 625 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 PRDM6Q9NQX0 595 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 ITM2CQ9NQX7 267 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 MRGBPQ9NV56 204 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 DNAJC11Q9NVH1 559 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.09□□□□□ -1.11
COPS4-201ENST00000264389 STOX2Q9P2F5 926 aaPredicted RBP8.09□□□□□ -1.11
COPS4-201ENST00000264389 WNT16Q9UBV4 365 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 TRPS1Q9UHF7 1281 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 ZNHIT2Q9UHR6 403 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 CYP8B1Q9UNU6 501 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 PTGDR2Q9Y5Y4 395 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 DNMT3AQ9Y6K1 912 aaPredicted RBP8.09□□□□□ -1.11
COPS4-201ENST00000264389 KANSL1LA0AUZ9 987 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 KRBA1A5PL33 1030 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 MYO1CO00159 1063 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 IFRD1O00458 451 aaPredicted RBP8.09□□□□□ -1.11
COPS4-201ENST00000264389 UBDO15205 165 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 SLC22A2O15244 555 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 VPS4BO75351 444 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 C1orf105O95561 183 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 RPN2P04844 631 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 SLC35G4P0C7Q5 338 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 LINC00032P0C843 101 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 EBLN1P0CF75 366 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 ITPKAP23677 461 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 AKT2P31751 481 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 CPA2P48052 419 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 ERVPABLB-1P60509 514 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 STX1BP61266 288 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 MXRA7P84157 204 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 KLF10Q13118 480 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 SQLEQ14534 574 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 TMEM198Q66K66 360 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 AGTRAPQ6RW13 159 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 XKR5Q6UX68 686 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 ASRGL1Q7L266 308 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 CHST15Q7LFX5 561 aaPredicted RBP8.09□□□□□ -1.11
COPS4-201ENST00000264389 MYLK4Q86YV6 388 aaPredicted RBP8.09□□□□□ -1.11
COPS4-201ENST00000264389 HOMEZQ8IX15 550 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 ZNF687Q8N1G0 1237 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 KIF2BQ8N4N8 673 aa8.09□□□□□ -1.11
COPS4-201ENST00000264389 MAFAQ8NHW3 353 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms