RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PABPC1LQ4VXU2 614 aaKnown RBP11.85□□□□□ -0.51
SMG6-201ENST00000263073 C4orf46Q504U0 113 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 OR10G2Q8NGC3 310 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 TMCO6Q96DC7 493 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 RHCGQ9UBD6 479 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 MST1RQ04912 1400 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 C5orf51A6NDU8 294 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 NIPSNAP2O75323 286 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 SOX14O95416 240 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 LINGO3P0C6S8 592 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 CCNCP24863 283 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 ASPAP45381 313 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 ARHGDIBP52566 201 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 IFI44LQ53G44 452 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 OR6K6Q8NGW6 343 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 ZNF516Q92618 1163 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 BTN2A3PQ96KV6 586 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 PKP4Q99569 1192 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 WACQ9BTA9 647 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 HTATIP2Q9BUP3 242 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 FTHL17Q9BXU8 183 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 MUC13Q9H3R2 512 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 OXSMQ9NWU1 459 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 ADGRB2O60241 1585 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 FXYD6-FXYD2A0A087WZ82 144 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.85□□□□□ -0.51
SMG6-201ENST00000263073 IRGMA1A4Y4 181 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 MYBPHLA2RUH7 354 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 PLOD2O00469 737 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 XKRYO14609 159 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 CCL16O15467 120 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 CSTF2P33240 577 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMG6-201ENST00000263073 MLLT10P55197 1068 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 UAP1L1Q3KQV9 507 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 RABL3Q5HYI8 236 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 SMYD5Q6GMV2 418 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 MED27Q6P2C8 311 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 SNX29P2Q8IUI4 249 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 GRPEL2Q8TAA5 225 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 ASB9Q96DX5 294 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 GPR20Q99678 358 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 TRMT61BQ9BVS5 477 aaKnown RBP11.85□□□□□ -0.51
SMG6-201ENST00000263073 SLC22A4Q9H015 551 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 FXYD6Q9H0Q3 95 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 PCDH10Q9P2E7 1040 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 LOC100130705A0A1B0GUX0 176 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 MATN3O15232 486 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 ATG13O75143 517 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 ALAS2P22557 587 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 IQCCQ4KMZ1 466 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 LRRC52Q8N7C0 313 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 SCAMP5Q8TAC9 235 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 PIGXQ8TBF5 258 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 SLC38A4Q969I6 547 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 UROC1Q96N76 676 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 AIF1LQ9BQI0 150 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 MTFR1LQ9H019 292 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 IFT46Q9NQC8 304 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 ANXA2P2A6NMY6 339 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 CXCL11O14625 94 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 ANXA2P07355 339 aaKnown RBP11.85□□□□□ -0.51
SMG6-201ENST00000263073 TIE1P35590 1138 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 NKX2-5P52952 324 aaPredicted RBP11.85□□□□□ -0.51
SMG6-201ENST00000263073 ARF3P61204 181 aaPredicted RBP11.85□□□□□ -0.51
SMG6-201ENST00000263073 TSPAN5P62079 268 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 ARF1P84077 181 aaKnown RBP11.85□□□□□ -0.51
SMG6-201ENST00000263073 ASTE1Q2TB18 679 aaPredicted RBP11.85□□□□□ -0.51
SMG6-201ENST00000263073 USP41Q3LFD5 358 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 ANKRD26P1Q6NSI1 321 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 PAQR3Q6TCH7 311 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 ZNF517Q6ZMY9 492 aaPredicted RBP11.85□□□□□ -0.51
SMG6-201ENST00000263073 ZNF598Q86UK7 904 aaKnown RBP11.85□□□□□ -0.51
SMG6-201ENST00000263073 GRHL3Q8TE85 626 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 C1QTNF7Q9BXJ2 289 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 ANKRA2Q9H9E1 313 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 TMEM27Q9HBJ8 222 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 TBC1D3DA0A087WVF3 549 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 TBC1D3IA0A087WXS9 549 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 TBC1D3EA0A087X179 549 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 TBC1D3KA0A087X1G2 549 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 TBC1D3FA6NER0 549 aaPredicted RBP11.84□□□□□ -0.51
SMG6-201ENST00000263073 YJEFN3A6XGL0 299 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 TBC1D3LB9A6J9 549 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 HCRTO43612 131 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 CDC40O60508 579 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMG6-201ENST00000263073 MTX2O75431 263 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 TBC1D3HP0C7X1 549 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 AHCYP23526 432 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 MAP2K4P45985 399 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 PSMD8P48556 350 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 CYP1B1Q16678 543 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 TBC1D3GQ6DHY5 549 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 TBC1D3CQ6IPX1 549 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 GPR142Q7Z601 462 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 CTU1Q7Z7A3 348 aaKnown RBP11.84□□□□□ -0.51
SMG6-201ENST00000263073 CAND1Q86VP6 1230 aaKnown RBP11.84□□□□□ -0.51
SMG6-201ENST00000263073 TBC1D3Q8IZP1 549 aaPredicted RBP11.84□□□□□ -0.51
SMG6-201ENST00000263073 ZNF304Q9HCX3 659 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 BRD7Q9NPI1 651 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 CARD8Q9Y2G2 431 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms