RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 INPP5KQ9BT40 448 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 KATNAL1Q9BW62 490 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 WDR12Q9GZL7 423 aaKnown RBP17.61■□□□□ 0.41
TRAF4-201ENST00000262395 SCUBE2Q9NQ36 999 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 FAM32AQ9Y421 112 aaKnown RBP17.61■□□□□ 0.41
TRAF4-201ENST00000262395 PCDHGA10Q9Y5H3 936 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 hCG_2039718K7EN88 272 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 MT-ND2P03891 347 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 SLC6A4P31645 630 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 GABARAPL2P60520 117 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 TRAF3Q13114 568 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 CARD16Q5EG05 197 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 LRRC8DQ7L1W4 858 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 SVOPLQ8N434 492 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 PEX13Q92968 403 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 FAM120BQ96EK7 910 aaKnown RBP17.6■□□□□ 0.41
TRAF4-201ENST00000262395 ABCB10Q9NRK6 738 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 GPC6Q9Y625 555 aaPredicted RBP17.6■□□□□ 0.41
TRAF4-201ENST00000262395 ANKRD36A6QL64 1941 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 DYTNA2CJ06 578 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 DRGXA6NNA5 263 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 LRATO95237 230 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 OXSR1O95747 527 aaPredicted RBP17.6■□□□□ 0.41
TRAF4-201ENST00000262395 CA5AP35218 305 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 RCVRNP35243 200 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 OR1G1P47890 313 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 P2RY8Q86VZ1 359 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 FATE1Q969F0 183 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 SEPT5Q99719 369 aaPredicted RBP17.6■□□□□ 0.41
TRAF4-201ENST00000262395 BOCQ9BWV1 1114 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 DCAF13Q9NV06 445 aaKnown RBP17.6■□□□□ 0.41
TRAF4-201ENST00000262395 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.6■□□□□ 0.41
TRAF4-201ENST00000262395 POU2F3Q9UKI9 436 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 ABCG2Q9UNQ0 655 aa17.6■□□□□ 0.41
TRAF4-201ENST00000262395 EIF3LQ9Y262 564 aaKnown RBP17.6■□□□□ 0.41
TRAF4-201ENST00000262395 ZFP37Q9Y6Q3 630 aaPredicted RBP17.6■□□□□ 0.41
TRAF4-201ENST00000262395 AREL1O15033 823 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 INSIG1O15503 277 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 FFAR2O15552 330 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 CTPS1P17812 591 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 TTPAP49638 278 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 SEPHS1P49903 392 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 TPTEP56180 551 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 PHC1P78364 1004 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 ZNF540Q8NDQ6 660 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 UBA2Q9UBT2 640 aaPredicted RBP17.59■□□□□ 0.41
TRAF4-201ENST00000262395 SLCO3A1Q9UIG8 710 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 ZNF490Q9ULM2 529 aaPredicted RBP17.59■□□□□ 0.41
TRAF4-201ENST00000262395 PKP3Q9Y446 797 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 RAI2Q9Y5P3 530 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 MYO1DO94832 1006 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 GABARAPO95166 117 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 MSH3P20585 1137 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 TGM1P22735 817 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 NKX2-5P52952 324 aaPredicted RBP17.59■□□□□ 0.41
TRAF4-201ENST00000262395 SBSNQ6UWP8 590 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 MRPL10Q7Z7H8 261 aaKnown RBP17.59■□□□□ 0.41
TRAF4-201ENST00000262395 ZNF598Q86UK7 904 aaKnown RBP17.59■□□□□ 0.41
TRAF4-201ENST00000262395 TTC30BQ8N4P2 665 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 C17orf50Q8WW18 174 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 RDH12Q96NR8 316 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 CCDC115Q96NT0 180 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 FBXO44Q9H4M3 255 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 USE1Q9NZ43 259 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 TMED5Q9Y3A6 229 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 GREB1Q4ZG55 1949 aa17.59■□□□□ 0.41
TRAF4-201ENST00000262395 UPK3BL1B0FP48 263 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 UPK3BL2E5RIL1 263 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 H0Y626 953 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 TAPBPO15533 448 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 TRIM16O95361 564 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 S100BP04271 92 aaPredicted RBP17.58■□□□□ 0.41
TRAF4-201ENST00000262395 LCKP06239 509 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 CLCN7P51798 805 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 TWF1Q12792 350 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 PHKG1Q16816 387 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 DGUOKQ16854 277 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 SYT16Q17RD7 645 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 C16orf59Q7L2K0 433 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 ZDHHC21Q8IVQ6 265 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 LKAAEAR1Q8TD35 194 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 MGME1Q9BQP7 344 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 CCL27Q9Y4X3 112 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 GBF1Q92538 1859 aa17.58■□□□□ 0.41
TRAF4-201ENST00000262395 TDRD15B5MCY1 1934 aaKnown RBP17.58■□□□□ 0.41
TRAF4-201ENST00000262395 A8MX80 341 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 F5H5T6 163 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 SEC24AO95486 1093 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 CDKN2CP42773 168 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 CLK3P49761 638 aaKnown RBP17.58■□□□□ 0.4
TRAF4-201ENST00000262395 YBEYP58557 167 aaPredicted RBP17.58■□□□□ 0.4
TRAF4-201ENST00000262395 EPS8Q12929 822 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 MAP2K5Q13163 448 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 SLC14A1Q13336 389 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 TOP3AQ13472 1001 aaPredicted RBP17.58■□□□□ 0.4
TRAF4-201ENST00000262395 CLCA4Q14CN2 919 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 RUNDC3AQ59EK9 446 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 RGL4Q8IZJ4 473 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 CIPCQ9C0C6 399 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 PER2O15055 1255 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms