RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 NUDT7P0C024 238 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 TFEBP19484 476 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 CA4P22748 312 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 ITGB7P26010 798 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 CDK16Q00536 496 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 LSM12Q3MHD2 195 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 PIGGQ5H8A4 983 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 NUGGCQ68CJ6 796 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 TMEM169Q96HH4 297 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 IL22Q9GZX6 179 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 ENKD1Q9H0I2 346 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 VCX3BQ9H321 246 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 SFXN1Q9H9B4 322 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 MRGBPQ9NV56 204 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 STK39Q9UEW8 545 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 POLG2Q9UHN1 485 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 ATP6AP2A0A1C7CYW4 349 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 A0A1W2PP55 124 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 ATP6AP2O75787 350 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 EPHA3P29320 983 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 BBS9Q3SYG4 887 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 MRM1Q6IN84 353 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 TCEAL6Q6IPX3 200 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 APOOLQ6UXV4 268 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 GET4Q7L5D6 327 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 STRA8Q7Z7C7 330 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 TCEAL3Q969E4 200 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 APIPQ96GX9 242 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 CNDP1Q96KN2 507 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF570Q96NI8 536 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 QRFPRQ96P65 431 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 COG4Q9H9E3 785 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 MAN2C1Q9NTJ4 1040 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 VAPAQ9P0L0 249 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 SLC7A8Q9UHI5 535 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 DNAJA2O60884 412 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 ADH5P11766 374 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 PSMC3P17980 439 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 RPS3P23396 243 aaKnown RBP eCLIP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 FSHRP23945 695 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 TPP2P29144 1249 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 HTR7P34969 479 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 CAMK2BQ13554 666 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 FAM53BQ14153 422 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 TAF1AQ15573 450 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 SLCO4C1Q6ZQN7 724 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 GALNT10Q86SR1 603 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 GPSM1Q86YR5 675 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 ELMOD1Q8N336 334 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 DNASE2BQ8WZ79 361 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF775Q96BV0 537 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 RNF31Q96EP0 1072 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF512Q96ME7 567 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 TMEM168Q9H0V1 697 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 LRRC4Q9HBW1 653 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 SLC24A2Q9UI40 661 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 PCDHB12Q9Y5F1 795 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 SERTM1A2A2V5 107 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 TRIM64BA6NI03 449 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 FURINP09958 794 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 POLR2IP36954 125 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 NEK2P51955 445 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 CDKL1Q00532 357 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 MC1RQ01726 317 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 NPTX1Q15818 432 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 MARC1Q5VT66 337 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF770Q6IQ21 691 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 LACC1Q8IV20 430 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 MMAAQ8IVH4 418 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 MAP7D3Q8IWC1 876 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 KRTCAP2Q8N6L1 136 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 ARMC2Q8NEN0 867 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 PJA1Q8NG27 643 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 OR56A3Q8NH54 315 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 GDAP1Q8TB36 358 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 BPIFB1Q8TDL5 484 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 KLK6Q92876 244 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 KIAA1191Q96A73 305 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 PAIP1Q9H074 479 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 TRIM45Q9H8W5 580 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 RRN3Q9NYV6 651 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 LOC105369274A0A096LPK9 316 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 LOC102723532A0A0G2JNH3 316 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 EEDO75530 441 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 CIB2O75838 187 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 CASP2P42575 452 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 NAA25Q14CX7 972 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 PNCKQ6P2M8 343 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 WDR88Q6ZMY6 472 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 OR4N4Q8N0Y3 316 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 SIX6OS1Q8N1H7 587 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF321PQ8N8H1 164 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 OR13H1Q8NG92 308 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 BTN2A2Q8WVV5 523 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF669Q96BR6 464 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 RAB17Q9H0T7 212 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 IGFLR1Q9H665 355 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 VPS37BQ9H9H4 285 aa5.45□□□□□ -1.54
TOPBP1-201ENST00000260810 CAPN10Q9HC96 672 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms