RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 GATA5Q9BWX5 397 aaPredicted RBP12.62□□□□□ -0.39
LSM8-201ENST00000249299 RAB11FIP5Q9BXF6 653 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 NSRP1Q9H0G5 558 aaKnown RBP12.62□□□□□ -0.39
LSM8-201ENST00000249299 TMEM168Q9H0V1 697 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 MIR1-1HGQ9H1L0 117 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 EPN3Q9H201 632 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 EML4Q9HC35 981 aaKnown RBP12.62□□□□□ -0.39
LSM8-201ENST00000249299 TM7SF3Q9NS93 570 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 ARL15Q9NXU5 204 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 HAO1Q9UJM8 370 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 PILRBQ9UKJ0 227 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 ADAMTS6Q9UKP5 1117 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 DNAJC16Q9Y2G8 782 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 CSNK1G3Q9Y6M4 447 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 COLEC10Q9Y6Z7 277 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 A0A0C4DFX4 3053 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 PIKFYVEQ9Y2I7 2098 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 KIR2DS5A0A0G2JLQ3 304 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 A0A0G2JNG1 304 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 WDR91A4D1P6 747 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 A6NCN8 305 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 KIR2DS3K7RE56 304 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 YKT6O15498 198 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 RPS17P08708 135 aaKnown RBP12.61□□□□□ -0.39
LSM8-201ENST00000249299 F3P13726 295 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 CTSEP14091 401 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 JUNDP17535 347 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 BGNP21810 368 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 ITPKAP23677 461 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 CCND1P24385 295 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 DHPSP49366 369 aaPredicted RBP12.61□□□□□ -0.39
LSM8-201ENST00000249299 ABCE1P61221 599 aaKnown RBP12.61□□□□□ -0.39
LSM8-201ENST00000249299 OCRLQ01968 901 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 BST1Q10588 318 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 RCN2Q14257 317 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 KIR2DS5Q14953 304 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 ZC3H14Q6PJT7 736 aaKnown RBP12.61□□□□□ -0.39
LSM8-201ENST00000249299 SPATS2Q86XZ4 545 aaKnown RBP12.61□□□□□ -0.39
LSM8-201ENST00000249299 RBM12BQ8IXT5 1001 aaKnown RBP12.61□□□□□ -0.39
LSM8-201ENST00000249299 RAB42Q8N4Z0 105 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 DEFB119Q8N690 84 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 OR9A1PQ8NGU1 263 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 PPP4R1Q8TF05 950 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 PHF21BQ96EK2 531 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 MAGEB10Q96LZ2 347 aaPredicted RBP12.61□□□□□ -0.39
LSM8-201ENST00000249299 SIKE1Q9BRV8 207 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 UNKQ9C0B0 810 aaKnown RBP12.61□□□□□ -0.39
LSM8-201ENST00000249299 WWP1Q9H0M0 922 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 TRIT1Q9H3H1 467 aaKnown RBP12.61□□□□□ -0.39
LSM8-201ENST00000249299 SPATA7Q9P0W8 599 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 SPASTQ9UBP0 616 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 APOBEC3BQ9UH17 382 aaKnown RBP12.61□□□□□ -0.39
LSM8-201ENST00000249299 KCNK6Q9Y257 313 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 ASF1AQ9Y294 204 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 PCDHGA5Q9Y5G8 931 aa12.61□□□□□ -0.39
LSM8-201ENST00000249299 TCP11X1B4DZS4 312 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 SLCO1B7G3V0H7 640 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 EDF1O60869 148 aaKnown RBP12.6□□□□□ -0.39
LSM8-201ENST00000249299 KATNA1O75449 491 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 STK16O75716 305 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 ERGP11308 486 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 MAOBP27338 520 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 ACTR1BP42025 376 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 CTSKP43235 329 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 ACTR1AP61163 376 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 PCDH1Q08174 1060 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 PRKAA1Q13131 559 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 DUOXA1Q1HG43 343 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 PLA2G4EQ3MJ16 856 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 IL27RAQ6UWB1 636 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 FRMD7Q6ZUT3 714 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 LRRC70Q7Z2Q7 622 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 RD3Q7Z3Z2 195 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 GKN2Q86XP6 184 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 NRROSQ86YC3 692 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 HMGCLL1Q8TB92 370 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 RMDN2Q96LZ7 410 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 TMEM237Q96Q45 408 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 PHOX2BQ99453 314 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 EGFL8Q99944 293 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 PITPNM3Q9BZ71 974 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 CD244Q9BZW8 370 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 OSGEPL1Q9H4B0 414 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 DNAJC28Q9NX36 388 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 TBC1D29Q9UFV1 150 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 LNPEPQ9UIQ6 1025 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 PNMA8BQ9ULN7 279 aaPredicted RBP12.6□□□□□ -0.39
LSM8-201ENST00000249299 SLCO1B1Q9Y6L6 691 aa12.6□□□□□ -0.39
LSM8-201ENST00000249299 NEMP2A6NFY4 417 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 PDZK1P1A8MUH7 402 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 LMO7DNF2Z398 122 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 K7EPI3 171 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 FAM107AO95990 144 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 FGF4P08620 206 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 VIMP08670 466 aaKnown RBP12.59□□□□□ -0.39
LSM8-201ENST00000249299 MTHFD1P11586 935 aaKnown RBP12.59□□□□□ -0.39
LSM8-201ENST00000249299 XRCC1P18887 633 aaPredicted RBP12.59□□□□□ -0.39
LSM8-201ENST00000249299 SLC6A12P48065 614 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 SLC1A6P48664 564 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 ARRB1P49407 418 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms