RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 C2CD4AQ8NCU7 369 aaPredicted RBP23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 MAGEC3Q8TD91 643 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 KCNJ9Q92806 393 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 CERS2Q96G23 380 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 CHMP2BQ9UQN3 213 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 BTN3A3O00478 584 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 TP73O15350 636 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 CDH3P22223 829 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 PRDX3P30048 256 aaKnown RBP23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 TMPRSS3P57727 454 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 HSD11B2P80365 405 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 TUBB2AQ13885 445 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 FRG1Q14331 258 aaKnown RBP23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 GBX1Q14549 363 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 KYNUQ16719 465 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 DUPD1Q68J44 220 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 GALNT7Q86SF2 657 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 ZFAND4Q86XD8 727 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 DTX1Q86Y01 620 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 IGDCC3Q8IVU1 814 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 ADGRF3Q8IZF5 1079 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 CFAP61Q8NHU2 1237 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 TUBB2BQ9BVA1 445 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 PDE7BQ9NP56 450 aa23.61■■□□□ 1.37
SDF2L1-201ENST00000248958 ANKRD11Q6UB99 2663 aaPredicted RBP23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 PIPSLA2A3N6 862 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 MAP3K7O43318 606 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 ERVK-10P10266 1014 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 CCNFP41002 786 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 ATP1A2P50993 1020 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 CAV1Q03135 178 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 PDIA2Q13087 525 aaKnown RBP23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 TMTC4Q5T4D3 741 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 STEAP4Q687X5 459 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 UNC5AQ6ZN44 842 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 D2HGDHQ8N465 521 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 SKA2Q8WVK7 121 aaPredicted RBP23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 PMEPA1Q969W9 287 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 RAD51AP1Q96B01 352 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 PWWP2AQ96N64 755 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 OR6C1Q96RD1 312 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 CTRCQ99895 268 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 RAB11FIP5Q9BXF6 653 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 DPH5Q9H2P9 285 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 XKR8Q9H6D3 395 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 APMAPQ9HDC9 416 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 ACTR10Q9NZ32 417 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 BTRCQ9Y297 605 aa23.6■■□□□ 1.37
SDF2L1-201ENST00000248958 SDK2Q58EX2 2172 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 EIF3HO15372 352 aaKnown RBP eCLIP23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 HAUS5O94927 633 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 FGF5P12034 268 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 RAB28P51157 221 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 CLCN7P51798 805 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 SH3BP2P78314 561 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 MPP1Q00013 466 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 UGT3A1Q6NUS8 523 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 NEK10Q6ZWH5 1172 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 UNC5BQ8IZJ1 945 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 RAB42Q8N4Z0 105 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 ZNF592Q92610 1267 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 CFAP36Q96G28 342 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 FCRL4Q96PJ5 515 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 CCNL2Q96S94 520 aaPredicted RBP23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 SYTL2Q9HCH5 934 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 PPANQ9NQ55 473 aaKnown RBP23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 LHX6Q9UPM6 363 aa23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 TMEM184BQ9Y519 407 aaPredicted RBP23.59■■□□□ 1.37
SDF2L1-201ENST00000248958 VPS26AO75436 327 aa23.58■■□□□ 1.37
SDF2L1-201ENST00000248958 CHRM5P08912 532 aaPredicted RBP23.58■■□□□ 1.37
SDF2L1-201ENST00000248958 TPBGLP0DKB5 382 aa23.58■■□□□ 1.37
SDF2L1-201ENST00000248958 MRPS25P82663 173 aaKnown RBP23.58■■□□□ 1.37
SDF2L1-201ENST00000248958 PPP1R3BQ86XI6 285 aa23.58■■□□□ 1.37
SDF2L1-201ENST00000248958 FBXO36Q8NEA4 188 aa23.58■■□□□ 1.37
SDF2L1-201ENST00000248958 AARSD1Q9BTE6 412 aaKnown RBP23.58■■□□□ 1.37
SDF2L1-201ENST00000248958 PITPNM3Q9BZ71 974 aa23.58■■□□□ 1.37
SDF2L1-201ENST00000248958 SPRY4Q9C004 299 aa23.58■■□□□ 1.37
SDF2L1-201ENST00000248958 TWSG1Q9GZX9 223 aa23.58■■□□□ 1.37
SDF2L1-201ENST00000248958 RARRES3Q9UL19 164 aa23.58■■□□□ 1.37
SDF2L1-201ENST00000248958 DHRS7Q9Y394 339 aa23.58■■□□□ 1.37
SDF2L1-201ENST00000248958 FAM208BQ5VWN6 2430 aa23.58■■□□□ 1.36
SDF2L1-201ENST00000248958 EIF3FO00303 357 aaPredicted RBP23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 MATN4O95460 622 aa23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 C1orf105O95561 183 aa23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 CBSLP0DN79 551 aa23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 ENO3P13929 434 aaPredicted RBP23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 PKLRP30613 574 aa23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 CBSP35520 551 aa23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 CARSP49589 748 aaKnown RBP23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 MAP7Q14244 749 aa23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 KIR2DS3Q14952 304 aa23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 MANEAQ5SRI9 462 aa23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 HP1BP3Q5SSJ5 553 aaPredicted RBP23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 TEDDM1Q5T9Z0 273 aa23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 ZNF549Q6P9A3 640 aa23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 CNSTQ6PJW8 725 aa23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 SPESP1Q6UW49 350 aa23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 RASGRP3Q8IV61 690 aa23.57■■□□□ 1.36
SDF2L1-201ENST00000248958 OR8K5Q8NH50 307 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms