RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 SSX5O60225 188 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 MAGEC1O60732 1142 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 DAB1O75553 588 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 PRAMEF12O95522 483 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 ADH1CP00326 375 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 TDGF1P13385 188 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 ITIH2P19823 946 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 IL10P22301 178 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 SOX18P35713 384 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 HTR2BP41595 481 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 PTGIRP43119 386 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 HADHBP55084 474 aaKnown RBP3.59□□□□□ -1.83
UFM1-201ENST00000239878 NTHL1P78549 312 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 CCNIQ14094 377 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 SEMA3AQ14563 771 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 CDK10Q15131 360 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 TBRG1Q3YBR2 411 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 TOR2AQ5JU69 321 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 FAM78AQ5JUQ0 283 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 RARS2Q5T160 578 aaKnown RBP3.59□□□□□ -1.83
UFM1-201ENST00000239878 STXBP5Q5T5C0 1151 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 MANEALQ5VSG8 457 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 SLC9A4Q6AI14 798 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 GTF2IRD2BQ6EKJ0 949 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 UGT3A1Q6NUS8 523 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 TMEM270Q6UE05 265 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 VITQ6UXI7 678 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 TRIM72Q6ZMU5 477 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 OTOAQ7RTW8 1153 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 VN1R5Q7Z5H4 357 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 RBM23Q86U06 439 aaKnown RBP3.59□□□□□ -1.83
UFM1-201ENST00000239878 GTF2IRD2Q86UP8 949 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 PIGZQ86VD9 579 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 ZDHHC17Q8IUH5 632 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 ZNF366Q8N895 744 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 GALNT11Q8NCW6 608 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 RBM15BQ8NDT2 890 aaKnown RBP3.59□□□□□ -1.83
UFM1-201ENST00000239878 HIPK4Q8NE63 616 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 OR6B3Q8NGW1 331 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 OR2T3Q8NH03 318 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 SCAMP5Q8TAC9 235 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 FATE1Q969F0 183 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 ACSF2Q96CM8 615 aaPredicted RBP3.59□□□□□ -1.83
UFM1-201ENST00000239878 NRBF2Q96F24 287 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 PLPPR2Q96GM1 343 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 TMEM80Q96HE8 168 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 HES6Q96HZ4 224 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 RCC1LQ96I51 464 aaKnown RBP3.59□□□□□ -1.83
UFM1-201ENST00000239878 TXNDC15Q96J42 360 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 CEP19Q96LK0 163 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 RBM15Q96T37 977 aaKnown RBP eCLIP3.59□□□□□ -1.83
UFM1-201ENST00000239878 FAM83CQ9BQN1 747 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 THTPAQ9BU02 230 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 TMEM109Q9BVC6 243 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 SLC46A2Q9BY10 475 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 PLA2G2FQ9BZM2 168 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 OR2B2Q9GZK3 357 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 SLC6A16Q9GZN6 736 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 SMOC2Q9H3U7 446 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 STN1Q9H668 368 aaKnown RBP3.59□□□□□ -1.83
UFM1-201ENST00000239878 ARMCX1Q9P291 453 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 HEY2Q9UBP5 337 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 TJP2Q9UDY2 1190 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 TRPS1Q9UHF7 1281 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 SLC24A2Q9UI40 661 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 NUP50Q9UKX7 468 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 DUSP12Q9UNI6 340 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 ZNF281Q9Y2X9 895 aa3.59□□□□□ -1.83
UFM1-201ENST00000239878 ARHGAP42A6NI28 874 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 OR6C65A6NJZ3 312 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 BTNL10A8MVZ5 291 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 TRDMT1O14717 391 aaKnown RBP3.59□□□□□ -1.84
UFM1-201ENST00000239878 BET1O15155 118 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 NUPL2O15504 423 aaKnown RBP3.59□□□□□ -1.84
UFM1-201ENST00000239878 COCHO43405 550 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 FAM155BO75949 473 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 TM7SF2O76062 418 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 CALB1P05937 261 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 IFI30P13284 250 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 ZNF182P17025 639 aaPredicted RBP3.59□□□□□ -1.84
UFM1-201ENST00000239878 PRKAR1BP31321 381 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 ALDH1A3P47895 512 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 MAPK10P53779 464 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 EPHB3P54753 998 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 SLC12A2P55011 1212 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 VBP1P61758 197 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 ACY1Q03154 408 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 OVGP1Q12889 678 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 TRAP1Q12931 704 aaKnown RBP3.59□□□□□ -1.84
UFM1-201ENST00000239878 NME3Q13232 169 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 OGFRL1Q5TC84 451 aaPredicted RBP3.59□□□□□ -1.84
UFM1-201ENST00000239878 POMZP3Q6PJE2 187 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 NUP54Q7Z3B4 507 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 KDELC2Q7Z4H8 507 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 GRASPQ7Z6J2 395 aaPredicted RBP3.59□□□□□ -1.84
UFM1-201ENST00000239878 ZC3H7AQ8IWR0 971 aaKnown RBP3.59□□□□□ -1.84
UFM1-201ENST00000239878 ARHGEF39Q8N4T4 335 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 ARFGAP1Q8N6T3 406 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 NIPA2Q8N8Q9 360 aa3.59□□□□□ -1.84
UFM1-201ENST00000239878 ZNF540Q8NDQ6 660 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms