RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ZNF33BQ06732 778 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 TMEM115Q12893 351 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-201ENST00000238688 HERC3Q15034 1050 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 ACSBG2Q5FVE4 666 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 CYHR1Q6ZMK1 362 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 LRRC70Q7Z2Q7 622 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 PIP4P1Q86T03 277 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 OR2I1PQ8NGU4 316 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 C1orf216Q8TAB5 229 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 MCOLN3Q8TDD5 553 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 ASB11Q8WXH4 323 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 DNASE2BQ8WZ79 361 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 SIPA1Q96FS4 1042 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 THOC1Q96FV9 657 aaKnown RBP12.91□□□□□ -0.34
SLIRP-201ENST00000238688 HIC2Q96JB3 615 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 FOPNLQ96NB1 174 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 DPEP2Q9H4A9 486 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 ZNF395Q9H8N7 513 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-201ENST00000238688 RMI1Q9H9A7 625 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 CYP4F12Q9HCS2 524 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 NDE1Q9NXR1 346 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 TAGLN3Q9UI15 199 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 SLCO1B1Q9Y6L6 691 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 CAPN7Q9Y6W3 813 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 H0YHG0 523 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 MYO1CO00159 1063 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 E2F3O00716 465 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 TOR1BO14657 336 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 MID1O15344 667 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 PLRG1O43660 514 aaKnown RBP12.9□□□□□ -0.34
SLIRP-201ENST00000238688 CDK14O94921 469 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 MATN4O95460 622 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 CATP04040 527 aaKnown RBP12.9□□□□□ -0.34
SLIRP-201ENST00000238688 CFIP05156 583 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 HOXC4P09017 264 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-201ENST00000238688 ESRRAP11474 423 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-201ENST00000238688 CCR7P32248 378 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 MRPL19P49406 292 aaKnown RBP12.9□□□□□ -0.34
SLIRP-201ENST00000238688 PGGT1BP53609 377 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 RPS14P62263 151 aaKnown RBP12.9□□□□□ -0.34
SLIRP-201ENST00000238688 SHC2P98077 582 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 GRIK2Q13002 908 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 MAPRE2Q15555 327 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 SMU1Q2TAY7 513 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 UAP1L1Q3KQV9 507 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 DNAL1Q4LDG9 190 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 SYTL3Q4VX76 610 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 LRRC73Q5JTD7 316 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 C10orf62Q5T681 223 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-201ENST00000238688 KANK2Q63ZY3 851 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 RAET1GQ6H3X3 334 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 MAVSQ7Z434 540 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 CACUL1Q86Y37 369 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 PARP9Q8IXQ6 854 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 SLC22A15Q8IZD6 547 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 DENND6BQ8NEG7 585 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 CEP76Q8TAP6 659 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 AGAP11Q8TF27 550 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 ELMO1Q92556 727 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 PTCD3Q96EY7 689 aaKnown RBP12.9□□□□□ -0.34
SLIRP-201ENST00000238688 COX14Q96I36 57 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 WRAP53Q9BUR4 548 aaKnown RBP12.9□□□□□ -0.34
SLIRP-201ENST00000238688 CCDC106Q9BWC9 280 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 GPR174Q9BXC1 333 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.9□□□□□ -0.34
SLIRP-201ENST00000238688 GALPQ9UBC7 116 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 NCKAP1Q9Y2A7 1128 aa12.9□□□□□ -0.34
SLIRP-201ENST00000238688 ZFC3H1O60293 1989 aaKnown RBP12.9□□□□□ -0.34
SLIRP-201ENST00000238688 SLC5A10A0PJK1 596 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 IQCF5A8MTL0 148 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 METTL12A8MUP2 240 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 ARHGAP33O14559 1287 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 SGTAO43765 313 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 UGDHO60701 494 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 NDUFS2O75306 463 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 PSIP1O75475 530 aaKnown RBP12.89□□□□□ -0.35
SLIRP-201ENST00000238688 CRCPO75575 148 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 WDR47O94967 919 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 SOD1P00441 154 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 CEACAM1P13688 526 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 NUDT1P36639 197 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 BNC1Q01954 994 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 PCDH1Q08174 1060 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 OGFOD2Q6N063 350 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 RFLNAQ6ZTI6 216 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 GPRIN3Q6ZVF9 776 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 CHSY3Q70JA7 882 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 KLHDC8AQ8IYD2 350 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 HDDC3Q8N4P3 179 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 AADATQ8N5Z0 425 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 PNPLA1Q8N8W4 532 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 DEFB124Q8NES8 71 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 CADM4Q8NFZ8 388 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 HM13Q8TCT9 377 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 LKAAEAR1Q8TD35 194 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 MAGEC3Q8TD91 643 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 FOXJ1Q92949 421 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 EXT2Q93063 718 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 FAM136AQ96C01 138 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 RHBDF1Q96CC6 855 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms