RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PYURFQ96I23 114 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 ACOT13Q9NPJ3 140 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 SCN3BQ9NY72 215 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 SLCO3A1Q9UIG8 710 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 ERVK-11Q9UQG0 969 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 VPS9D1Q9Y2B5 631 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 A0A0D9SEW6 157 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 C2orf81A6NN90 581 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 A8MU76 341 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 E5RI56 91 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 OTCP00480 354 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 CTSHP09668 335 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 HOXC8P31273 242 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 GJA8P48165 433 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 PIK3CGP48736 1102 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 ALDH7A1P49419 539 aaKnown RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 TTPAP49638 278 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 CDC20Q12834 499 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 CARD16Q5EG05 197 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 CES5AQ6NT32 575 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 CEP68Q76N32 757 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 CALHM3Q86XJ0 350 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 PLPP6Q8IY26 295 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 DACH2Q96NX9 599 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 ZFP14Q9HCL3 533 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 OSGIN1Q9UJX0 560 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 PNMA8BQ9ULN7 279 aaPredicted RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 TNPO3Q9Y5L0 923 aaKnown RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 PRLP01236 227 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 IL6P05231 212 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 IL1RNP18510 177 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 PSMA3P25788 255 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 SERPINB1P30740 379 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 PCYT1AP49585 367 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 GZMMP51124 257 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 DAPP51397 102 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 FCGRTP55899 365 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 HMGCS1Q01581 520 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 IL1RL1Q01638 556 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 ATG9BQ674R7 924 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 MRPL10Q7Z7H8 261 aaKnown RBP15.19■□□□□ 0.02
DDX55-201ENST00000238146 LACC1Q8IV20 430 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 LIX1Q8N485 282 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 ZNF540Q8NDQ6 660 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 KLHDC9Q8NEP7 349 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 OR52E6Q96RD3 313 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 MGME1Q9BQP7 344 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 SIAEQ9HAT2 523 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 CPNE5Q9HCH3 593 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 FARSBQ9NSD9 589 aaKnown RBP15.19■□□□□ 0.02
DDX55-201ENST00000238146 ATP11BQ9Y2G3 1177 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 FAM220BPB1ANY3 271 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 M0QZ92 97 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 FFAR3O14843 346 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 GPR42O15529 346 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 RECQL5O94762 991 aaPredicted RBP15.19■□□□□ 0.02
DDX55-201ENST00000238146 HNRNPFP52597 415 aaKnown RBP15.19■□□□□ 0.02
DDX55-201ENST00000238146 KEAP1Q14145 624 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 SBSNQ6UWP8 590 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 CYP2U1Q7Z449 544 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 PLEKHH3Q7Z736 793 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 LYSMD2Q8IV50 215 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 ZDHHC21Q8IVQ6 265 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 GLB1L3Q8NCI6 653 aaPredicted RBP15.19■□□□□ 0.02
DDX55-201ENST00000238146 EXOC2Q96KP1 924 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 SUSD3Q96L08 255 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 CLMPQ9H6B4 373 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 SP140LQ9H930 580 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 BPIFA1Q9NP55 256 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 ABCB10Q9NRK6 738 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 C1orf109Q9NX04 203 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 TRPV2Q9Y5S1 764 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 HSPE1-MOB4S4R3N1 261 aa15.19■□□□□ 0.02
DDX55-201ENST00000238146 AREL1O15033 823 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 RGS10O43665 173 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 UPK1BO75841 260 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 LPOP22079 712 aaPredicted RBP15.18■□□□□ 0.02
DDX55-201ENST00000238146 HOXD9P28356 352 aaPredicted RBP15.18■□□□□ 0.02
DDX55-201ENST00000238146 RCVRNP35243 200 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 TGFBR2P37173 567 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 MAGEA2P43356 314 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 CLCN4P51793 760 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 CLCN7P51798 805 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 CARTPTQ16568 116 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 ZRANB3Q5FWF4 1079 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 SUSD1Q6UWL2 747 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 PLD3Q8IV08 490 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 MCFD2Q8NI22 146 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 HTRA1Q92743 480 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 FAM120BQ96EK7 910 aaKnown RBP15.18■□□□□ 0.02
DDX55-201ENST00000238146 NSUN3Q9H649 340 aaKnown RBP15.18■□□□□ 0.02
DDX55-201ENST00000238146 GMPPBQ9Y5P6 360 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 RGS14O43566 566 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 CD36P16671 472 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 HSPA7P48741 367 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 MAPKAPK2P49137 400 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 CPT1AP50416 773 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 PHC1P78364 1004 aa15.18■□□□□ 0.02
DDX55-201ENST00000238146 SF3B4Q15427 424 aaKnown RBP eCLIP15.18■□□□□ 0.021e-13■■■■■ 68.7
DDX55-201ENST00000238146 ATAD3BQ5T9A4 648 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms