RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 FSTL4Q6MZW2 842 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 FIP1L1Q6UN15 594 aaKnown RBP7.09□□□□□ -1.27
CPS1-201ENST00000233072 ZNF783Q6ZMS7 281 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 FAM129CQ86XR2 697 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 IQCKQ8N0W5 287 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 CAMKVQ8NCB2 501 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 KAT8Q9H7Z6 458 aaKnown RBP7.09□□□□□ -1.27
CPS1-201ENST00000233072 STOX2Q9P2F5 926 aaPredicted RBP7.09□□□□□ -1.27
CPS1-201ENST00000233072 PDE10AQ9Y233 779 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 POFUT2Q9Y2G5 429 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 FCF1Q9Y324 198 aaKnown RBP7.09□□□□□ -1.27
CPS1-201ENST00000233072 NR2E1Q9Y466 385 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 OAS3Q9Y6K5 1087 aaKnown RBP7.09□□□□□ -1.27
CPS1-201ENST00000233072 WRBO00258 174 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 LSM1O15116 133 aaKnown RBP7.09□□□□□ -1.27
CPS1-201ENST00000233072 TREHO43280 583 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 ORC5O43913 435 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 AP2A2O94973 939 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 STBD1O95210 358 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 ADH1BP00325 375 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 RB1P06400 928 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 CLCN7P51798 805 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 GBX2P52951 348 aaPredicted RBP7.09□□□□□ -1.27
CPS1-201ENST00000233072 KCTD21Q4G0X4 260 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 PDCD4Q53EL6 469 aaKnown RBP7.09□□□□□ -1.27
CPS1-201ENST00000233072 FOXR1Q6PIV2 292 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 PLET1Q6UQ28 207 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 VITQ6UXI7 678 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 CHRDL2Q6WN34 429 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 SYVN1Q86TM6 617 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 GEMIN6Q8WXD5 167 aaKnown RBP7.09□□□□□ -1.27
CPS1-201ENST00000233072 NCSTNQ92542 709 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 SUSD3Q96L08 255 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 SLC39A3Q9BRY0 314 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 NTPCRQ9BSD7 190 aaKnown RBP7.09□□□□□ -1.27
CPS1-201ENST00000233072 RC3H2Q9HBD1 1191 aaKnown RBP7.09□□□□□ -1.27
CPS1-201ENST00000233072 CPQQ9Y646 472 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 ZNF208O43345 1280 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 PSIP1O75475 530 aaKnown RBP7.09□□□□□ -1.27
CPS1-201ENST00000233072 PEPDP12955 493 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 FECHP22830 423 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 MLLT3P42568 568 aaPredicted RBP7.09□□□□□ -1.27
CPS1-201ENST00000233072 LILRA4P59901 499 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 PDGFRLQ15198 375 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 ZFP69Q49AA0 526 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 GDPD4Q6W3E5 623 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 CELF5Q8N6W0 485 aaKnown RBP7.09□□□□□ -1.27
CPS1-201ENST00000233072 OR56A1Q8NGH5 318 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 GPR152Q8TDT2 470 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 NAT14Q8WUY8 206 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 XAGE5Q8WWM1 108 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 CEP295NLQ96MC4 621 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 SAMD11Q96NU1 681 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 NODALQ96S42 347 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 C11orf49Q9H6J7 331 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 COQ4Q9Y3A0 265 aa7.09□□□□□ -1.27
CPS1-201ENST00000233072 VIRMAQ69YN4 1812 aaKnown RBP7.09□□□□□ -1.28
CPS1-201ENST00000233072 ATP6AP2A0A1C7CYW4 349 aa7.09□□□□□ -1.28
CPS1-201ENST00000233072 WNT9AO14904 365 aa7.09□□□□□ -1.28
CPS1-201ENST00000233072 SLC1A2P43004 574 aa7.09□□□□□ -1.28
CPS1-201ENST00000233072 SH3D19Q5HYK7 790 aa7.09□□□□□ -1.28
CPS1-201ENST00000233072 CXorf57Q6NSI4 855 aaKnown RBP7.09□□□□□ -1.28
CPS1-201ENST00000233072 AMZ2Q86W34 360 aa7.09□□□□□ -1.28
CPS1-201ENST00000233072 TMEM17Q86X19 198 aa7.09□□□□□ -1.28
CPS1-201ENST00000233072 CHCHD4Q8N4Q1 142 aa7.09□□□□□ -1.28
CPS1-201ENST00000233072 RBM15BQ8NDT2 890 aaKnown RBP7.09□□□□□ -1.28
CPS1-201ENST00000233072 DIRAS2Q96HU8 199 aa7.09□□□□□ -1.28
CPS1-201ENST00000233072 MAPKAP1Q9BPZ7 522 aa7.09□□□□□ -1.28
CPS1-201ENST00000233072 MND1Q9BWT6 205 aa7.09□□□□□ -1.28
CPS1-201ENST00000233072 LRRC3Q9BY71 257 aa7.09□□□□□ -1.28
CPS1-201ENST00000233072 B3GNT5Q9BYG0 378 aa7.09□□□□□ -1.28
CPS1-201ENST00000233072 DPEP3Q9H4B8 488 aa7.09□□□□□ -1.28
CPS1-201ENST00000233072 FKBPLQ9UIM3 349 aa7.09□□□□□ -1.28
CPS1-201ENST00000233072 FBXO9Q9UK97 447 aaPredicted RBP7.09□□□□□ -1.28
CPS1-201ENST00000233072 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.09□□□□□ -1.28
CPS1-201ENST00000233072 SLC22A1O15245 554 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 AIREO43918 545 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 PRLP01236 227 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 GJB1P08034 283 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 UNGP13051 313 aaPredicted RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 FOSL2P15408 326 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 ZNF20P17024 532 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 CHRNB2P17787 502 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 GSTM4Q03013 218 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 FPGSQ05932 587 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 ARL13AQ5H913 290 aaPredicted RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 PERM1Q5SV97 790 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 KREMEN2Q8NCW0 462 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 TBATAQ96M53 351 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 TMEM209Q96SK2 561 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 GSDMCQ9BYG8 508 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 WDR26Q9H7D7 661 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 TCF7L1Q9HCS4 588 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 FBXW2Q9UKT8 454 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 SCML2Q9UQR0 700 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 XRN1Q8IZH2 1706 aaKnown RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 CAMTA1Q9Y6Y1 1673 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 PIK3C2AO00443 1686 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 AXIN1O15169 862 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 PCDH7O60245 1069 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms