RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 SCML2Q9UQR0 700 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 SQORQ9Y6N5 450 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 STON1Q9Y6Q2 735 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 FAM234BA2RU67 622 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 MCIDASD6RGH6 385 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 H7C0S8 307 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 WNT9AO14904 365 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 OR5F1O95221 314 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 GJA1P17302 382 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 PSMA1P25786 263 aaKnown RBP11.31□□□□□ -0.6
NOD1-201ENST00000222823 RYKP34925 604 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 PRR5P85299 388 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 HMGCS1Q01581 520 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 NDUFA9Q16795 377 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 LYSMD3Q7Z3D4 306 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 CYP2U1Q7Z449 544 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 SLCO6A1Q86UG4 719 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 OR2AP1Q8NGE2 309 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 RASSF5Q8WWW0 418 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 RBM18Q96H35 190 aaKnown RBP11.31□□□□□ -0.6
NOD1-201ENST00000222823 LMLNQ96KR4 655 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 SIGLEC10Q96LC7 697 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 MIPEPQ99797 713 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 PCDHAC1Q9H158 963 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 ZNF395Q9H8N7 513 aaPredicted RBP11.31□□□□□ -0.6
NOD1-201ENST00000222823 FBXW2Q9UKT8 454 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 RBM47A0AV96 593 aaKnown RBP11.31□□□□□ -0.6
NOD1-201ENST00000222823 ANKRD66B4E2M5 251 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 CASKO14936 926 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 SNAI1O95863 264 aaPredicted RBP11.31□□□□□ -0.6
NOD1-201ENST00000222823 ALPIP09923 528 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 IL12AP29459 219 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 CDH12P55289 794 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 ZNF846Q147U1 533 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 MINDY4Q4G0A6 757 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 FAAH2Q6GMR7 532 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 IKBIPQ70UQ0 350 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 AHSA2Q719I0 299 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 KRT74Q7RTS7 529 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 WFIKKN2Q8TEU8 576 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 OR52B2Q96RD2 323 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 PCBD2Q9H0N5 130 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 ZDHHC3Q9NYG2 299 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 SLC2A6Q9UGQ3 507 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 TESMINQ9Y4I5 508 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 IRGMA1A4Y4 181 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.3□□□□□ -0.6
NOD1-201ENST00000222823 hCG_2039718K7EN88 272 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 SCAMP1O15126 338 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 TP73O15350 636 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 F7P08709 466 aaPredicted RBP11.3□□□□□ -0.6
NOD1-201ENST00000222823 ITGAXP20702 1163 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 PEX5LQ8IYB4 626 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 KAT2AQ92830 837 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 GPR22Q99680 433 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 DUSP26Q9BV47 211 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 LRRC3Q9BY71 257 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 MTRRQ9UBK8 725 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 KAT6AQ92794 2004 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 PLK4O00444 970 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 MBLAC2Q68D91 279 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 GIPC3Q8TF64 312 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 ARNTL2Q8WYA1 636 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 PRICKLE1Q96MT3 831 aaPredicted RBP11.3□□□□□ -0.6
NOD1-201ENST00000222823 CDK15Q96Q40 435 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 NODALQ96S42 347 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 ELL3Q9HB65 397 aaPredicted RBP11.3□□□□□ -0.6
NOD1-201ENST00000222823 USP29Q9HBJ7 922 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 CCDC182A6NF36 153 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 HAS3O00219 553 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 ECI2O75521 394 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 MYBPC1Q00872 1141 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 ZNF33AQ06730 810 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 QPRTQ15274 297 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 GDPD4Q6W3E5 623 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 ASRGL1Q7L266 308 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.3□□□□□ -0.6
NOD1-201ENST00000222823 CLDN19Q8N6F1 224 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 C12orf66Q96MD2 445 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 TMEM209Q96SK2 561 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 GINS4Q9BRT9 223 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 COQ10BQ9H8M1 238 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 CXorf21Q9HAI6 301 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 CRTAC1Q9NQ79 661 aa11.3□□□□□ -0.6
NOD1-201ENST00000222823 PSMD11O00231 422 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 TRMUO75648 421 aaKnown RBP11.29□□□□□ -0.6
NOD1-201ENST00000222823 ALAS2P22557 587 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 DLG1Q12959 904 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 OLIG2Q13516 323 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 SERINC3Q13530 473 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 CHRNA6Q15825 494 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 BEND5Q7L4P6 421 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 CMTM8Q8IZV2 173 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 KLK6Q92876 244 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 BORCS5Q969J3 196 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 COX4I2Q96KJ9 171 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 AKTIPQ9H8T0 292 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 ITM2CQ9NQX7 267 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 NFKBIL1Q9UBC1 381 aaPredicted RBP11.29□□□□□ -0.6
NOD1-201ENST00000222823 PIRO00625 290 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms