RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ZNF549Q6P9A3 640 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 SPATA9Q9BWV2 254 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 DKKL1Q9UK85 242 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 TRPM3Q9HCF6 1732 aaPredicted RBP13.48□□□□□ -0.25
SIX4-201ENST00000216513 UBR2Q8IWV8 1755 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 H3BNC9 293 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 TCF4P15884 667 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 TSNQ15631 228 aaKnown RBP13.48□□□□□ -0.25
SIX4-201ENST00000216513 OLFML1Q6UWY5 402 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 Q6ZSR6 202 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 VN1R2Q8NFZ6 395 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 EDAQ92838 391 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 ZNF641Q96N77 438 aaPredicted RBP13.48□□□□□ -0.25
SIX4-201ENST00000216513 TNFRSF10BO14763 440 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 PRAMEF11O60813 436 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 TGFB1P01137 390 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 HNRNPA2B1P22626 353 aaKnown RBP13.48□□□□□ -0.25
SIX4-201ENST00000216513 SLC6A2P23975 617 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 CLDN2P57739 230 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 TRIM16LQ309B1 348 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 KIAA1161Q6NSJ0 714 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 ARMC8Q8IUR7 673 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 GHDCQ8N2G8 530 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 TERB1Q8NA31 727 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 ITCHQ96J02 903 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 FBRSQ9HAH7 460 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 CORO2BQ9UQ03 480 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 GNB5O14775 395 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 NR4A1P22736 598 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 RAB8AP61006 207 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 BST1Q10588 318 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 SERINC3Q13530 473 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 GPRC6AQ5T6X5 926 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 PIWIL4Q7Z3Z4 852 aaKnown RBP13.48□□□□□ -0.25
SIX4-201ENST00000216513 CLNKQ7Z7G1 428 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 NEK7Q8TDX7 302 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 SLC46A2Q9BY10 475 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 BCAT2O15382 392 aaPredicted RBP13.48□□□□□ -0.25
SIX4-201ENST00000216513 NRP2O60462 931 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 OR6B1O95007 311 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 C6P13671 934 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 BMP7P18075 431 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 NAA20P61599 178 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 NCF4Q15080 339 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 SLC1A5Q15758 541 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 NCBP2-AS2Q69YL0 99 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 PRMT9Q6P2P2 845 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 PLXDC1Q8IUK5 500 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 FNIP2Q9P278 1114 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 SORCS3Q9UPU3 1222 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 MFHAS1Q9Y4C4 1052 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 LILRB3O75022 631 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 IL33O95760 270 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 FBLP22087 321 aaKnown RBP13.47□□□□□ -0.25
SIX4-201ENST00000216513 TNFRSF4P43489 277 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 CLCN7P51798 805 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 HHEXQ03014 270 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 LIPMQ5VYY2 423 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 IRF2BP1Q8IU81 584 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 CLDN19Q8N6F1 224 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 UBASH3BQ8TF42 649 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 RCN3Q96D15 328 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 NOL6Q9H6R4 1146 aaKnown RBP13.47□□□□□ -0.25
SIX4-201ENST00000216513 GALNT8Q9NY28 637 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 NHSQ6T4R5 1651 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 DPP6P42658 865 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 PPIDQ08752 370 aaKnown RBP13.47□□□□□ -0.25
SIX4-201ENST00000216513 LARS2Q15031 903 aaKnown RBP13.47□□□□□ -0.25
SIX4-201ENST00000216513 SUSD1Q6UWL2 747 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 LRRTM3Q86VH5 581 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 EXOC3L1Q86VI1 746 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 TMEM27Q9HBJ8 222 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 PISDQ9UG56 409 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 PPM1HQ9ULR3 514 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 COPG1Q9Y678 874 aaKnown RBP13.47□□□□□ -0.25
SIX4-201ENST00000216513 IGKV6D-21A0A0A0MT36 114 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 KLHL18O94889 574 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 SMAD4Q13485 552 aaKnown RBP13.47□□□□□ -0.25
SIX4-201ENST00000216513 MARCH8Q5T0T0 291 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 LPCAT4Q643R3 524 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 EID3Q8N140 333 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 N4BP2Q86UW6 1770 aaPredicted RBP13.47□□□□□ -0.25
SIX4-201ENST00000216513 OR2B3O76000 313 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 LAMP2P13473 410 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 FASP25445 335 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 GDF10P55107 478 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 FCRL5Q96RD9 977 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 PDE4DIPQ5VU43 2346 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 GSRP00390 522 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 AHCYP23526 432 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 INCA1Q0VD86 236 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 PCBP2Q15366 365 aaKnown RBP eCLIP13.47□□□□□ -0.25
SIX4-201ENST00000216513 ANKRD33Q7Z3H0 272 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 PEX5LQ8IYB4 626 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 AGAP11Q8TF27 550 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 SMPDL3AQ92484 453 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 KAT2AQ92830 837 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 SH3GL3Q99963 347 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 COQ4Q9Y3A0 265 aa13.47□□□□□ -0.25
SIX4-201ENST00000216513 TSHRP16473 764 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms