RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 GGT5P36269 586 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 ETV3P41162 512 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 PWP1Q13610 501 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 PTGR1Q14914 329 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 DHCR24Q15392 516 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 TMEM240Q5SV17 173 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 LDLRAP1Q5SW96 308 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 HENMT1Q5T8I9 393 aaKnown RBP8.07□□□□□ -1.12
VAMP3-201ENST00000054666 ZNF697Q5TEC3 545 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 TMEM215Q68D42 235 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 KRT80Q6KB66 452 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 SERPINA13PQ6UXR4 307 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 Q6ZVL8 140 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 DPPA4Q7L190 304 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 KIAA0907Q7Z7F0 614 aaPredicted RBP8.07□□□□□ -1.12
VAMP3-201ENST00000054666 RGL4Q8IZJ4 473 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 LIX1Q8N485 282 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 AADATQ8N5Z0 425 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 PACRGLQ8N7B6 248 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 TNIP2Q8NFZ5 429 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 OR8J3Q8NGG0 315 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 PHOSPHO2Q8TCD6 241 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 ASB11Q8WXH4 323 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 SORCS1Q8WY21 1168 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 MYLIPQ8WY64 445 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 TMEM159Q96B96 161 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 MRGPRX3Q96LB0 322 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 ZNF597Q96LX8 424 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 NSMCE2Q96MF7 247 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 PPM1MQ96MI6 270 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 TSC22D3Q99576 134 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 CGREF1Q99674 301 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 ACTL8Q9H568 366 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 C8orf4Q9NR00 106 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 DNAJC11Q9NVH1 559 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 DUS2Q9NX74 493 aaKnown RBP8.07□□□□□ -1.12
VAMP3-201ENST00000054666 DKK3Q9UBP4 350 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.07□□□□□ -1.12
VAMP3-201ENST00000054666 CCL27Q9Y4X3 112 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 SAC3D1A6NKF1 404 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 C16orf96A6NNT2 1141 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 ANKRD28O15084 1053 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 RSL1D1O76021 490 aaKnown RBP8.07□□□□□ -1.12
VAMP3-201ENST00000054666 CYP17A1P05093 508 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 GSTM1P09488 218 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 MTHFD1P11586 935 aaKnown RBP8.07□□□□□ -1.12
VAMP3-201ENST00000054666 IRS1P35568 1242 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 MAPK9P45984 424 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 VASPP50552 380 aaPredicted RBP8.07□□□□□ -1.12
VAMP3-201ENST00000054666 DGKQP52824 942 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 GSTM4Q03013 218 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 KCNC3Q14003 757 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 ACOX1Q15067 660 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 MAPKAPK3Q16644 382 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 PTCHD3Q3KNS1 767 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 FAM174BQ3ZCQ3 159 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 HMBOX1Q6NT76 420 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 RAVER1Q8IY67 606 aaKnown RBP8.07□□□□□ -1.12
VAMP3-201ENST00000054666 ADGRG5Q8IZF4 528 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 HCAR2Q8TDS4 363 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 OSCP1Q8WVF1 389 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 CENPNQ96H22 339 aaPredicted RBP8.07□□□□□ -1.12
VAMP3-201ENST00000054666 ZSWIM3Q96MP5 696 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 SH3GL1Q99961 368 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 C9orf16Q9BUW7 83 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 RIOK2Q9BVS4 552 aaKnown RBP8.07□□□□□ -1.12
VAMP3-201ENST00000054666 FARSBQ9NSD9 589 aaKnown RBP8.07□□□□□ -1.12
VAMP3-201ENST00000054666 SLAMF8Q9P0V8 285 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 FAM8A1Q9UBU6 413 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 TMPRSS11EQ9UL52 423 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 AP3M1Q9Y2T2 418 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 PRRC2BQ5JSZ5 2229 aaKnown RBP8.07□□□□□ -1.12
VAMP3-201ENST00000054666 MKI67P46013 3256 aaKnown RBP8.07□□□□□ -1.12
VAMP3-201ENST00000054666 PDE4DIPQ5VU43 2346 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 LINC01553A4QN01 128 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 OR2AG2A6NM03 316 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 PSMD11O00231 422 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 KPNA3O00505 521 aaPredicted RBP8.06□□□□□ -1.12
VAMP3-201ENST00000054666 HOXC11O43248 304 aaPredicted RBP8.06□□□□□ -1.12
VAMP3-201ENST00000054666 ATG13O75143 517 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 CATP04040 527 aaKnown RBP8.06□□□□□ -1.12
VAMP3-201ENST00000054666 PRNPP04156 253 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 PGRP06401 933 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 CTSLP07711 333 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 POU2F2P09086 479 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 PRPS2P11908 318 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 TIMP2P16035 220 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 NCK1P16333 377 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 OXTRP30559 389 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 MMP12P39900 470 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 PEX19P40855 299 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 HALP42357 657 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 SLC6A12P48065 614 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 MTPNP58546 118 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 RPS14P62263 151 aaKnown RBP8.06□□□□□ -1.12
VAMP3-201ENST00000054666 CBX2Q14781 532 aaPredicted RBP8.06□□□□□ -1.12
VAMP3-201ENST00000054666 POM121L1PQ3SYA9 428 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 LIN52Q52LA3 116 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 INTS11Q5TA45 600 aaKnown RBP8.06□□□□□ -1.12
VAMP3-201ENST00000054666 VRK3Q8IV63 474 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms