RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ANKRD22Q5VYY1 191 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF517Q6ZMY9 492 aaPredicted RBP5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ANKS1BQ7Z6G8 1248 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 KIF18BQ86Y91 864 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF366Q8N895 744 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 TAS1R2Q8TE23 839 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ASB15Q8WXK1 588 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ELMO3Q96BJ8 720 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SLC4A9Q96Q91 983 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 LPIN3Q9BQK8 851 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ERVK-6Q9BXR3 956 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ADAMTS10Q9H324 1103 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 FLRT1Q9NZU1 646 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 FKBPLQ9UIM3 349 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 PRELID3BQ9Y3B1 194 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 PCNX2A6NKB5 2137 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 A0A087X0B3 334 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 FABP12A6NFH5 140 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 HSBP1L1C9JCN9 74 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 NDST3O95803 873 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 KLRC2P26717 231 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 CCR8P51685 355 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 DUSP4Q13115 394 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 CAMK2DQ13557 499 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 CYP2R1Q6VVX0 501 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 MFSD2AQ8NA29 543 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 UBA3Q8TBC4 463 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 BTBD2Q9BX70 525 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ARHGAP20Q9P2F6 1191 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 GGT7Q9UJ14 662 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 CACNA1BQ00975 2339 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 PRAMEF33A0A0G2JMD5 474 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 TRIM64BA6NI03 449 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 PP2D1A8MPX8 630 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 TNFRSF11BO00300 401 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 UBFD1O14562 309 aaKnown RBP5.98□□□□□ -1.45
VPS13D-201ENST00000011700 GABRDO14764 452 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SLC7A4O43246 635 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 PRAMEF10O60809 474 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SASH3O75995 380 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 IRF1P10914 325 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 GSTM2P28161 218 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SPAM1P38567 509 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SSR2P43308 183 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SP140Q13342 867 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 NKAPLQ5M9Q1 402 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 MPP7Q5T2T1 576 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 TSPAN33Q86UF1 283 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 FAM35AQ86V20 835 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ACAT2Q9BWD1 397 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SLC4A5Q9BY07 1137 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 DPAGT1Q9H3H5 408 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 FAM86C1Q9NVL1 165 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 HYKKA2RU49 373 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 FGFR3P22607 806 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 NKX1-1Q15270 411 aaPredicted RBP5.98□□□□□ -1.45
VPS13D-201ENST00000011700 NPTX1Q15818 432 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 MED27Q6P2C8 311 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 DENND6BQ8NEG7 585 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 FBXO30Q8TB52 745 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 CXorf21Q9HAI6 301 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ASB3Q9Y575 518 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 HEATR5AQ86XA9 2040 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 DLGAP1O14490 977 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 HSD3B1P14060 373 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 IL7RP16871 459 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 KCNC4Q03721 635 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 COQ5Q5HYK3 327 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF767PQ75MW2 155 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 RALGPS2Q86X27 583 aaPredicted RBP5.98□□□□□ -1.45
VPS13D-201ENST00000011700 CCDC24Q8N4L8 307 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SLC41A3Q96GZ6 507 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF471Q9BX82 626 aaPredicted RBP5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SLC29A3Q9BZD2 475 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 P2RX2Q9UBL9 471 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 COG5Q9UP83 839 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 FAM196BA6NMK8 535 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 H0Y858 1186 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 TOR1AO14656 332 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ATMINO43313 823 aaPredicted RBP5.98□□□□□ -1.45
VPS13D-201ENST00000011700 EPOP01588 193 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 BPGMP07738 259 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 MMP8P22894 467 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SSTR1P30872 391 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 CD86P42081 329 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 MAPK12P53778 367 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 PTPN5P54829 565 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 TAS2R50P59544 299 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 TMEM164Q5U3C3 297 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ARMC10Q8N2F6 343 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 PCDH19Q8TAB3 1148 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 C22orf15Q8WYQ4 148 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 TAMM41Q96BW9 452 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 MFSD14AQ96MC6 490 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 UBQLN2Q9UHD9 624 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 TNS2Q63HR2 1409 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SMIM35A0A1B0GVV1 85 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 GJE1A6NN92 205 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 DISC1C4P0D8 188 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 TSPAN4O14817 238 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms