RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 TtpaQ8BWP5 278 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Nudt4Q8R2U6 179 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Slc22a19Q8VCA0 551 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 RabepkQ8VCH5 380 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 HnmtQ91VF2 295 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rev1Q920Q2 1249 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 ArhgdiaQ99PT1 204 aaKnown RBP8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tmem114Q9D563 222 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Kcne2Q9D808 123 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Glod5Q9D8I3 148 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Atp5oQ9DB20 213 aaKnown RBP8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Dgat2Q9DCV3 388 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tp73Q9JJP2 631 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 MycsQ9Z304 431 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 CorinQ9Z319 1113 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm35911A0A1D5RLS7 214 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 AccsA2AIG8 502 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Mup18A2BIM8 181 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Trgv2A2J008 116 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Azin1O35484 448 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Hnrnph1O35737 449 aaKnown RBP8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Mup11P04938 181 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pip5k1bP70181 539 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Hnrnph2P70333 449 aaKnown RBP8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm21320Q4FZE8 181 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 GcgrQ61606 485 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Hesx1Q61658 185 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Larp4bQ6A0A2 741 aaKnown RBP8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 HhipQ7TN16 700 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Sdr16c5Q7TQA3 309 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr1197Q7TR13 314 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr1196Q7TR14 314 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Skida1Q80YR3 822 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rnf38Q8BI21 518 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Chrnb3Q8BMN3 464 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cnpy4Q8BQ47 245 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr315Q8VFG7 309 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Golga7Q91W53 137 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cyp2j9Q924D1 502 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Fam136aQ9CR98 138 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Lcn9Q9D267 178 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ccdc130Q9D516 385 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Amdhd1Q9DBA8 426 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gpr45Q9EQQ4 373 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Lima1Q9ERG0 753 aaKnown RBP8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tssc4Q9JHE7 317 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ccdc22Q9JIG7 627 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Plscr3Q9JIZ9 296 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 AadatQ9WVM8 425 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 R3hdmlA2A5I3 253 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Mllt3A2AM29 569 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 E2f3O35261 457 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Akr1b7P21300 316 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Guca1aP43081 202 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Clec4fP70194 548 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Fam98aQ3TJZ6 515 aaKnown RBP8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pabpn1lQ5XFR0 273 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Smad2Q62432 467 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pou4f2Q63934 411 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pik3r3Q64143 461 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Usp8Q80U87 1080 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Arhgap19Q8BRH3 494 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ythdf3Q8BYK6 585 aaKnown RBP8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Lrif1Q8CDD9 755 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Wdr47Q8CGF6 920 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gpr153Q8K0Z9 631 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Abhd11Q8K4F5 307 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 BlmhQ8R016 455 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Akr1c20Q8VC77 323 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Mul1Q8VCM5 352 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gtf2h3Q8VD76 309 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr690Q8VH18 315 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pcdhb10Q91VE5 797 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ms4a10Q99N03 267 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 EbplQ9D0P0 206 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 ItpaQ9D892 198 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tubb3Q9ERD7 450 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Scamp4Q9JKV5 230 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 CalcrlQ9R1W5 463 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Dock6Q8VDR9 2080 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pi4kaE9Q3L2 2105 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Mup6A2AV72 179 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Unc5cO08747 931 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Apoa4P06728 395 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 FerP70451 823 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cry1P97784 606 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Treml2Q2LA85 329 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm8773Q3UQ24 132 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zc3h12aQ5D1E7 596 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Slc10a7Q5PT53 340 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Lcp2Q60787 533 aaKnown RBP8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Prmt8Q6PAK3 394 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Paqr3Q6TCG8 311 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr384Q7TRX8 312 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Znf569Q80W31 679 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Znf770Q8BIQ8 705 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cabcoco1Q8CDT7 208 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zbtb44Q8R0A2 453 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr1093Q8VF14 322 aa8.51□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr806Q8VFI2 313 aa8.51□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms