RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 CDKL1Q00532 357 aa19.36■□□□□ 0.69
PHGDH-210ENST00000641115 STX3Q13277 289 aa19.36■□□□□ 0.69
PHGDH-210ENST00000641115 TCEA2Q15560 299 aa19.36■□□□□ 0.69
PHGDH-210ENST00000641115 ZNF542PQ5EBM4 170 aa19.36■□□□□ 0.69
PHGDH-210ENST00000641115 RASGRP3Q8IV61 690 aa19.36■□□□□ 0.69
PHGDH-210ENST00000641115 MAGEC3Q8TD91 643 aa19.36■□□□□ 0.69
PHGDH-210ENST00000641115 ZC3H10Q96K80 434 aaKnown RBP19.36■□□□□ 0.69
PHGDH-210ENST00000641115 GSDMCQ9BYG8 508 aa19.36■□□□□ 0.69
PHGDH-210ENST00000641115 APOBEC3BQ9UH17 382 aaKnown RBP19.36■□□□□ 0.69
PHGDH-210ENST00000641115 STX16-NPEPL1H3BU86 382 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 STX16O14662 325 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 JUNDP17535 347 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 AK4P27144 223 aaPredicted RBP19.35■□□□□ 0.69
PHGDH-210ENST00000641115 HALP42357 657 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 BDKRB1P46663 353 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 NAGLUP54802 743 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 HERVK_113P63132 956 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 CFAP157Q5JU67 520 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 CDKL4Q5MAI5 379 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 SULT1C3Q6IMI6 304 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 TTC23LQ6PF05 361 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 SLC30A9Q6PML9 568 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 SPATS2Q86XZ4 545 aaKnown RBP19.35■□□□□ 0.69
PHGDH-210ENST00000641115 CCNYL1Q8N7R7 359 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 ZBTB44Q8NCP5 570 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 TFGQ92734 400 aaPredicted RBP19.35■□□□□ 0.69
PHGDH-210ENST00000641115 L3HYPDHQ96EM0 354 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 RMDN2Q96LZ7 410 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 TMEM237Q96Q45 408 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 ERVK-6Q9BXR3 956 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 ZDHHC5Q9C0B5 715 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 PCDHGA2Q9Y5H1 932 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 ST14Q9Y5Y6 855 aa19.35■□□□□ 0.69
PHGDH-210ENST00000641115 C1orf105O95561 183 aa19.34■□□□□ 0.69
PHGDH-210ENST00000641115 CSF2P04141 144 aa19.34■□□□□ 0.69
PHGDH-210ENST00000641115 VIMP08670 466 aaKnown RBP19.34■□□□□ 0.69
PHGDH-210ENST00000641115 NME1P15531 152 aaKnown RBP19.34■□□□□ 0.69
PHGDH-210ENST00000641115 IMPDH1P20839 514 aa19.34■□□□□ 0.69
PHGDH-210ENST00000641115 BST1Q10588 318 aa19.34■□□□□ 0.69
PHGDH-210ENST00000641115 SETDB1Q15047 1291 aa19.34■□□□□ 0.69
PHGDH-210ENST00000641115 UAP1L1Q3KQV9 507 aa19.34■□□□□ 0.69
PHGDH-210ENST00000641115 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.34■□□□□ 0.69
PHGDH-210ENST00000641115 CAPRIN2Q6IMN6 1127 aaKnown RBP19.34■□□□□ 0.69
PHGDH-210ENST00000641115 TCAIMQ8N3R3 496 aa19.34■□□□□ 0.69
PHGDH-210ENST00000641115 FBXO15Q8NCQ5 510 aaPredicted RBP19.34■□□□□ 0.69
PHGDH-210ENST00000641115 CCL4L1Q8NHW4 92 aa19.34■□□□□ 0.69
PHGDH-210ENST00000641115 GPBAR1Q8TDU6 330 aa19.34■□□□□ 0.69
PHGDH-210ENST00000641115 CHMP6Q96FZ7 201 aa19.34■□□□□ 0.69
PHGDH-210ENST00000641115 C12orf66Q96MD2 445 aa19.34■□□□□ 0.69
PHGDH-210ENST00000641115 GATA5Q9BWX5 397 aaPredicted RBP19.34■□□□□ 0.69
PHGDH-210ENST00000641115 TCEAL2Q9H3H9 227 aaPredicted RBP19.34■□□□□ 0.69
PHGDH-210ENST00000641115 KLF15Q9UIH9 416 aa19.34■□□□□ 0.69
PHGDH-210ENST00000641115 WDR37Q9Y2I8 494 aa19.34■□□□□ 0.69
PHGDH-210ENST00000641115 TMEM114B3SHH9 223 aa19.33■□□□□ 0.69
PHGDH-210ENST00000641115 SIM2Q14190 667 aaPredicted RBP19.33■□□□□ 0.69
PHGDH-210ENST00000641115 ZNF678Q5SXM1 525 aa19.33■□□□□ 0.69
PHGDH-210ENST00000641115 DCUN1D3Q8IWE4 304 aa19.33■□□□□ 0.69
PHGDH-210ENST00000641115 PRDM8Q9NQV8 689 aa19.33■□□□□ 0.69
PHGDH-210ENST00000641115 WWOXQ9NZC7 414 aa19.33■□□□□ 0.69
PHGDH-210ENST00000641115 TBC1D29Q9UFV1 150 aa19.33■□□□□ 0.69
PHGDH-210ENST00000641115 PILRBQ9UKJ0 227 aa19.33■□□□□ 0.69
PHGDH-210ENST00000641115 TNPO3Q9Y5L0 923 aaKnown RBP19.33■□□□□ 0.69
PHGDH-210ENST00000641115 CFAP20Q9Y6A4 193 aaKnown RBP19.33■□□□□ 0.69
PHGDH-210ENST00000641115 TTC28Q96AY4 2481 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 GMNCA6NCL1 334 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 PRR33A8MZF0 331 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 EEF1DP29692 281 aaKnown RBP19.33■□□□□ 0.68
PHGDH-210ENST00000641115 HNMTP50135 292 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 PRRT3Q5FWE3 981 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 WASH2PQ6VEQ5 465 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 MBOAT1Q6ZNC8 495 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 OR6Y1Q8NGX8 325 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 OR5K2Q8NHB8 316 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 PPP4R1Q8TF05 950 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 RHBDF1Q96CC6 855 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 CCDC138Q96M89 665 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 ZNF317Q96PQ6 595 aaPredicted RBP19.33■□□□□ 0.68
PHGDH-210ENST00000641115 TRIT1Q9H3H1 467 aaKnown RBP19.33■□□□□ 0.68
PHGDH-210ENST00000641115 C11orf16Q9NQ32 467 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 WASH6PQ9NQA3 447 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 IMP3Q9NV31 184 aaKnown RBP19.33■□□□□ 0.68
PHGDH-210ENST00000641115 THAP1Q9NVV9 213 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 PTBP2Q9UKA9 531 aaKnown RBP19.33■□□□□ 0.68
PHGDH-210ENST00000641115 PCOLCE2Q9UKZ9 415 aa19.33■□□□□ 0.68
PHGDH-210ENST00000641115 GON4LQ3T8J9 2241 aa19.32■□□□□ 0.68
PHGDH-210ENST00000641115 TDRD6O60522 2096 aaKnown RBP19.32■□□□□ 0.68
PHGDH-210ENST00000641115 A0A1B0GVT2 93 aa19.32■□□□□ 0.68
PHGDH-210ENST00000641115 SRRM3A6NNA2 597 aaPredicted RBP19.32■□□□□ 0.68
PHGDH-210ENST00000641115 NPHS1O60500 1241 aa19.32■□□□□ 0.68
PHGDH-210ENST00000641115 SUPT7LO94864 414 aa19.32■□□□□ 0.68
PHGDH-210ENST00000641115 SIX3O95343 332 aaPredicted RBP19.32■□□□□ 0.68
PHGDH-210ENST00000641115 SERPINB5P36952 375 aa19.32■□□□□ 0.68
PHGDH-210ENST00000641115 DPP6P42658 865 aa19.32■□□□□ 0.68
PHGDH-210ENST00000641115 SLC1A6P48664 564 aa19.32■□□□□ 0.68
PHGDH-210ENST00000641115 NUBP1P53384 320 aa19.32■□□□□ 0.68
PHGDH-210ENST00000641115 ABCE1P61221 599 aaKnown RBP19.32■□□□□ 0.68
PHGDH-210ENST00000641115 NAA20P61599 178 aa19.32■□□□□ 0.68
PHGDH-210ENST00000641115 RCN2Q14257 317 aa19.32■□□□□ 0.68
PHGDH-210ENST00000641115 ELOCQ15369 112 aa19.32■□□□□ 0.68
PHGDH-210ENST00000641115 ABRAXAS1Q6UWZ7 409 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms