RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CRYL1Q9Y2S2 319 aa6.58□□□□□ -1.36
UPF3B-205ENST00000636792 VWA7Q9Y334 891 aa6.58□□□□□ -1.36
UPF3B-205ENST00000636792 SNX11Q9Y5W9 270 aa6.58□□□□□ -1.36
UPF3B-205ENST00000636792 PSAT1Q9Y617 370 aa6.58□□□□□ -1.36
UPF3B-205ENST00000636792 LNP1A1A4G5 178 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 A6NCN8 305 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 PABPN1LA6NDY0 278 aaKnown RBP6.57□□□□□ -1.36
UPF3B-205ENST00000636792 LILRA5A6NI73 299 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 ZNF839A8K0R7 811 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 POC1B-GALNT4F8VUJ3 575 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 SLC16A5O15375 505 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 POP7O75817 140 aaKnown RBP6.57□□□□□ -1.36
UPF3B-205ENST00000636792 WISP3O95389 354 aaPredicted RBP6.57□□□□□ -1.36
UPF3B-205ENST00000636792 ALBP02768 609 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 C8GP07360 202 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 ANXA6P08133 673 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 PRSS56P0CW18 603 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 ACP5P13686 325 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 PNLIPP16233 465 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 CHRM3P20309 590 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 SDHBP21912 280 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 GCAP28676 217 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 TYK2P29597 1187 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 FMO4P31512 558 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 ACTR1BP42025 376 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 GRK6P43250 576 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 AP1S2P56377 157 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 IL2P60568 153 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 ACTR1AP61163 376 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 NAA20P61599 178 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 CDKL1Q00532 357 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 BNC1Q01954 994 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 NHLH1Q02575 133 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 ZNF844Q08AG5 666 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 GPS2Q13227 327 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 BOP1Q14137 746 aaKnown RBP6.57□□□□□ -1.36
UPF3B-205ENST00000636792 USP10Q14694 798 aaKnown RBP6.57□□□□□ -1.36
UPF3B-205ENST00000636792 CLPPQ16740 277 aaPredicted RBP6.57□□□□□ -1.36
UPF3B-205ENST00000636792 FAM83EQ2M2I3 478 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 KRT71Q3SY84 523 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 ZNF789Q5FWF6 425 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 TPRG1LQ5T0D9 272 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 METTL2BQ6P1Q9 378 aaKnown RBP6.57□□□□□ -1.36
UPF3B-205ENST00000636792 KLC3Q6P597 504 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 ZNF549Q6P9A3 640 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 OGFOD3Q6PK18 319 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 CRTC3Q6UUV7 619 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 DBX2Q6ZNG2 339 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 PRR23CQ6ZRP0 262 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 KANSL1Q7Z3B3 1105 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 TBC1D1Q86TI0 1168 aaPredicted RBP6.57□□□□□ -1.36
UPF3B-205ENST00000636792 SLC9B2Q86UD5 537 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 C17orf82Q86X59 251 aaPredicted RBP6.57□□□□□ -1.36
UPF3B-205ENST00000636792 HID1Q8IV36 788 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 TBC1D21Q8IYX1 336 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 MYO1HQ8N1T3 1032 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 SFRP1Q8N474 314 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 DCLK2Q8N568 766 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 MINDY1Q8N5J2 469 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 CLDN19Q8N6F1 224 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 ARL10Q8N8L6 244 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 GPATCH11Q8N954 259 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 FAM181AQ8N9Y4 354 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 RHEBL1Q8TAI7 183 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 SAP25Q8TEE9 199 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 SH3KBP1Q96B97 665 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 SGF29Q96ES7 293 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 UBXN10Q96LJ8 280 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 EDEM2Q9BV94 578 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.57□□□□□ -1.36
UPF3B-205ENST00000636792 DERL2Q9GZP9 239 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 GAREM1Q9H706 876 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 MVB12BQ9H7P6 319 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 NEUROD4Q9HD90 331 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 TM7SF3Q9NS93 570 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 GULP1Q9UBP9 304 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 POLG2Q9UHN1 485 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 ZNHIT2Q9UHR6 403 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 MOSPD1Q9UJG1 213 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 MID2Q9UJV3 735 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 TLK1Q9UKI8 766 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 TMCO1Q9UM00 188 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 CDYLQ9Y232 598 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 CA5BQ9Y2D0 317 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 MED16Q9Y2X0 877 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 TMEM98Q9Y2Y6 226 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 NFS1Q9Y697 457 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 SLCO1B1Q9Y6L6 691 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 CABIN1Q9Y6J0 2220 aa6.57□□□□□ -1.36
UPF3B-205ENST00000636792 KRTAP4-8A0A0G2JLE6 195 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 A6NJY4 79 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 TRIM49D1C9J1S8 452 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 MATN2O00339 956 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 MAP2K7O14733 419 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 NUDT21O43809 227 aaKnown RBP6.56□□□□□ -1.36
UPF3B-205ENST00000636792 OPA1O60313 960 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 GLRA3O75311 464 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 NIPSNAP2O75323 286 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 FKBP9O95302 570 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 TRIM16O95361 564 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms