RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 LIN52Q52LA3 116 aa12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 ZNF697Q5TEC3 545 aa12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 IRAK1BP1Q5VVH5 260 aa12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 PTRH1Q86Y79 214 aaKnown RBP12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 RGL4Q8IZJ4 473 aa12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 DPP10Q8N608 796 aa12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 FRS2Q8WU20 508 aa12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 MTFMTQ96DP5 389 aaKnown RBP12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 MRGPRX3Q96LB0 322 aa12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 TRAPPC9Q96Q05 1148 aa12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 NTMT1Q9BV86 223 aa12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 FAM192AQ9GZU8 254 aa12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 ZFP14Q9HCL3 533 aa12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 AGPAT4Q9NRZ5 378 aa12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 TMEM45AQ9NWC5 275 aa12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 ERVW-1Q9UQF0 538 aa12.18□□□□□ -0.46
UBASH3A-209ENST00000635325 A0A1B0GTW7 788 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 WASH3PC4AMC7 463 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 C5orf67F2Z3F1 127 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 RGS14O43566 566 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 LEFTY1O75610 366 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 CTSLP07711 333 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ENO2P09104 434 aaPredicted RBP12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 OR56A5P0C7T3 313 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 EBLN1P0CF75 366 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 PTPN2P17706 415 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 MSH3P20585 1137 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 HRH2P25021 359 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 PSMA4P25789 261 aaKnown RBP12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 VARSP26640 1264 aaKnown RBP12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 AKT1P31749 480 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 IRS1P35568 1242 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ETV3P41162 512 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 EEFSECP57772 596 aaKnown RBP12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 UBE3AQ05086 875 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 GBX1Q14549 363 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 CBX2Q14781 532 aaPredicted RBP12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 CPSF6Q16630 551 aaKnown RBP eCLIP12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 CYP51A1Q16850 503 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 POM121L1PQ3SYA9 428 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ZNF648Q5T619 568 aaPredicted RBP12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ELMSAN1Q6PJG2 1045 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 Q6ZVL8 140 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 UBE2R2Q712K3 238 aaPredicted RBP12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 TRIM46Q7Z4K8 759 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 EPHX4Q8IUS5 362 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 HID1Q8IV36 788 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 CHERPQ8IWX8 916 aaKnown RBP12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 CHCHD4Q8N4Q1 142 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 POF1BQ8WVV4 589 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ING5Q8WYH8 240 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 PPP3R2Q96LZ3 170 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 RPF2Q9H7B2 306 aaKnown RBP12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 TRPS1Q9UHF7 1281 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 NOTCH4Q99466 2003 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ARHGAP10A1A4S6 786 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ANKRD33BA6NCL7 494 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 CCDC85CA6NKD9 419 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 H0YJX3 145 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 PDLIM1O00151 329 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 HNRNPRO43390 633 aaKnown RBP12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 RB1P06400 928 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ANXA5P08758 320 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ATP1B2P14415 290 aaPredicted RBP12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 DDX6P26196 483 aaKnown RBP eCLIP12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 CLCN2P51788 898 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ARHGAP15Q53QZ3 475 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ARSIQ5FYB1 569 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 IYDQ6PHW0 289 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ZBTB49Q6ZSB9 765 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 SATL1Q86VE3 508 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 LIX1Q8N485 282 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 KRTCAP2Q8N6L1 136 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 BEND7Q8N7W2 519 aaPredicted RBP12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ZNF366Q8N895 744 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ASB11Q8WXH4 323 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 PYCR2Q96C36 320 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ULK4Q96C45 1275 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 TSC22D3Q99576 134 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 SLC12A9Q9BXP2 914 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ACTR8Q9H981 624 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 SLC24A3Q9HC58 644 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 PCDH12Q9NPG4 1184 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 KLHL42Q9P2K6 505 aa12.17□□□□□ -0.46
UBASH3A-209ENST00000635325 ENO4A6NNW6 628 aa12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 ARNTLO00327 626 aa12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 SLC28A1O00337 649 aa12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 SGTAO43765 313 aa12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 NUAK1O60285 661 aa12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 SEC22BO75396 215 aa12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 MT-ND1P03886 318 aa12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 NELFEP18615 380 aaKnown RBP12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 GGT5P36269 586 aa12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 RECQLP46063 649 aaPredicted RBP12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 GNPDA1P46926 289 aa12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 POLR2LP62875 67 aaKnown RBP12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 SHHQ15465 462 aa12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 FXNQ16595 210 aa12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 METTL2BQ6P1Q9 378 aaKnown RBP12.16□□□□□ -0.46
UBASH3A-209ENST00000635325 BRAT1Q6PJG6 821 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms