RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CCL7P80098 99 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 ARF5P84085 180 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 MGAT5Q09328 741 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 ARHGEF7Q14155 803 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 HADHQ16836 314 aaKnown RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 C15orf59Q2T9L4 293 aaPredicted RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 SMTNL2Q2TAL5 461 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 MANEAQ5SRI9 462 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 CRTC3Q6UUV7 619 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 SETD3Q86TU7 594 aaPredicted RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 PCDH20Q8N6Y1 951 aaKnown RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 EXD3Q8N9H8 876 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 GDAP1Q8TB36 358 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 DYDC1Q8WWB3 177 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 DIO2Q92813 273 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 GRAMD1AQ96CP6 724 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 PLCD4Q9BRC7 762 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 ZYG11BQ9C0D3 744 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 MLXIPLQ9NP71 852 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 KCNK9Q9NPC2 374 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 NKIRAS1Q9NYS0 192 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 OR12D3Q9UGF7 316 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 TBK1Q9UHD2 729 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 IL17BQ9UHF5 180 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 GRID1Q9ULK0 1009 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 HS3ST3A1Q9Y663 406 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 SDK2Q58EX2 2172 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 HIVEP3Q5T1R4 2406 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 ILVBLA1L0T0 632 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 LMO7DNF2Z398 122 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 RAMP2O60895 175 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 ULK1O75385 1050 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 PIGNO95427 931 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 ITGA2BP08514 1039 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 HTR1BP28222 390 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 MIPP30301 263 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 STX2P32856 288 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 INHBCP55103 352 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 SESN3P58005 492 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 SNRPD1P62314 119 aaKnown RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 RAD51Q06609 339 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 RIPK1Q13546 671 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 NOMO1Q15155 1222 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 PDK4Q16654 411 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 ZNF805Q5CZA5 627 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 FNBP1LQ5T0N5 605 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 OTUD1Q5VV17 481 aaPredicted RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 DCP2Q8IU60 420 aaKnown RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 ZBED8Q8IZ13 594 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 GBP7Q8N8V2 638 aaPredicted RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 OR2AP1Q8NGE2 309 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 CLIP3Q96DZ5 547 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 SCYL1Q96KG9 808 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 RMDN2Q96LZ7 410 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 NPY6RQ99463 290 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 KLF6Q99612 283 aaPredicted RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 CLPBQ9H078 707 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 TRABDQ9H4I3 376 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 ZWILCHQ9H900 591 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 PSMC3IPQ9P2W1 217 aaPredicted RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 SAE1Q9UBE0 346 aaPredicted RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 LOXL2Q9Y4K0 774 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 RNF215Q9Y6U7 377 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 NAV3Q8IVL0 2385 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 C2CD4BA6NLJ0 364 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 FAM72CH0Y354 149 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 CHUKO15111 745 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 PIP5K1CO60331 668 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 BANF1O75531 89 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 F9P00740 461 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 CCNB1P14635 433 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 SKIV2L2P42285 1042 aaKnown RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 CXCR3P49682 368 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 ARL4CP56559 192 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 PDIA2Q13087 525 aaKnown RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 PTK2BQ14289 1009 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 ELOCQ15369 112 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 BRMS1LQ5PSV4 323 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 FAM72AQ5TYM5 149 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 FAM72DQ6L9T8 149 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 PPP4R4Q6NUP7 873 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 ATG14Q6ZNE5 492 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 ASRGL1Q7L266 308 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 BEND5Q7L4P6 421 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 MTDHQ86UE4 582 aaKnown RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 FAM72BQ86X60 149 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 VSIG1Q86XK7 387 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 PDCD6IPQ8WUM4 868 aaKnown RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 RTP4Q96DX8 246 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 SGF29Q96ES7 293 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 PDXPQ96GD0 296 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 C1QTNF7Q9BXJ2 289 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 CYP4F12Q9HCS2 524 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 MRPL40Q9NQ50 206 aaKnown RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 ZNF71Q9NQZ8 489 aaPredicted RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 NCKIPSDQ9NZQ3 722 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 KLQ9UEF7 1012 aa4.78□□□□□ -1.64
LINC00550-201ENST00000629293 SETD2Q9BYW2 2564 aaPredicted RBP4.78□□□□□ -1.64
LINC00550-201ENST00000629293 TRBV23OR9-2A0A075B6M9 112 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms