RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 SPACA3Q8IXA5 215 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 SLC22A15Q8IZD6 547 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 UBXN4Q92575 508 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 CFAP36Q96G28 342 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 PWWP2AQ96N64 755 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 CD180Q99467 661 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 MAP3K3Q99759 626 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 CTRCQ99895 268 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 ASPSCR1Q9BZE9 553 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 DPH1Q9BZG8 443 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 DPH5Q9H2P9 285 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 ZNF768Q9H5H4 540 aaKnown RBP13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 XKR8Q9H6D3 395 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 PPANQ9NQ55 473 aaKnown RBP13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 FBXO6Q9NRD1 293 aaPredicted RBP13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 IARS2Q9NSE4 1012 aaKnown RBP13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 FOXJ2Q9P0K8 574 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 POLG2Q9UHN1 485 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 CHMP2BQ9UQN3 213 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 PCDHB11Q9Y5F2 797 aa13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 KMT2BQ9UMN6 2715 aaPredicted RBP13.59□□□□□ -0.23
PCDHGC3-208ENST00000622836 TLCD2A6NGC4 264 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 MATN2O00339 956 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 POLR1CO15160 346 aaPredicted RBP13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 RAD51CO43502 376 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 NIPSNAP2O75323 286 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 F7P08709 466 aaPredicted RBP13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 PKMP14618 531 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 CDH3P22223 829 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 CD82P27701 267 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 SHMT2P34897 504 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 ELK3P41970 407 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 SLC1A2P43004 574 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 RPL21P46778 160 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 ADARP55265 1226 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 MC2RQ01718 297 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 HSP90AA5PQ58FG0 334 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 SPANXN3Q5MJ09 141 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 PLEKHS1Q5SXH7 462 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 TTC23LQ6PF05 361 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 CEACAM20Q6UY09 585 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 ZFAND4Q86XD8 727 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 VRK3Q8IV63 474 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 SIDT2Q8NBJ9 832 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 OR5K2Q8NHB8 316 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 FOPNLQ96NB1 174 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 BIRC8Q96P09 236 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 TEFMQ96QE5 360 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 OR6C1Q96RD1 312 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 ERP44Q9BS26 406 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 DDA1Q9BW61 102 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 TFB2MQ9H5Q4 396 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 SOHLH2Q9NX45 425 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 ZC3H7BQ9UGR2 993 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 TSR3Q9UJK0 312 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 FBXO5Q9UKT4 447 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 PLAGL1Q9UM63 463 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 UTP11Q9Y3A2 253 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 B3GALT1Q9Y5Z6 326 aa13.58□□□□□ -0.24
PCDHGC3-208ENST00000622836 AHCTF1Q8WYP5 2266 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 CELSR3Q9NYQ7 3312 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 IGHV5-51A0A0C4DH38 117 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 STMND1H3BQB6 276 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 BTN3A1O00481 513 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 GPC4O75487 556 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 KRT37O76014 449 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 SLCO2B1O94956 709 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 S1PR4O95977 384 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 ERVK-10P10266 1014 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 LIPCP11150 499 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 SH3BP2P78314 561 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 MPP1Q00013 466 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 PDIA2Q13087 525 aaKnown RBP13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 COL28A1Q2UY09 1125 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 ZNF789Q5FWF6 425 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 CYB5D1Q6P9G0 228 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 UNC5BQ8IZJ1 945 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 BMPERQ8N8U9 685 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 PMEPA1Q969W9 287 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 LRRC39Q96DD0 335 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 ELMO2Q96JJ3 720 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 ZPBPQ9BS86 351 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 B3GNT4Q9C0J1 378 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 RAB17Q9H0T7 212 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 FBXO8Q9NRD0 319 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 CDC23Q9UJX2 597 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 CDYLQ9Y232 598 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 PCDHGA3Q9Y5H0 932 aa13.57□□□□□ -0.24
PCDHGC3-208ENST00000622836 PIPSLA2A3N6 862 aa13.56□□□□□ -0.24
PCDHGC3-208ENST00000622836 C2orf74A8MZ97 194 aa13.56□□□□□ -0.24
PCDHGC3-208ENST00000622836 BTN3A3O00478 584 aa13.56□□□□□ -0.24
PCDHGC3-208ENST00000622836 MAP3K7O43318 606 aa13.56□□□□□ -0.24
PCDHGC3-208ENST00000622836 NELFEP18615 380 aaKnown RBP13.56□□□□□ -0.24
PCDHGC3-208ENST00000622836 CARSP49589 748 aaKnown RBP13.56□□□□□ -0.24
PCDHGC3-208ENST00000622836 KPNA2P52292 529 aaKnown RBP13.56□□□□□ -0.24
PCDHGC3-208ENST00000622836 UCNP55089 124 aa13.56□□□□□ -0.24
PCDHGC3-208ENST00000622836 TLE3Q04726 772 aa13.56□□□□□ -0.24
PCDHGC3-208ENST00000622836 CLN3Q13286 438 aa13.56□□□□□ -0.24
PCDHGC3-208ENST00000622836 TTLL9Q3SXZ7 439 aa13.56□□□□□ -0.24
PCDHGC3-208ENST00000622836 TMTC4Q5T4D3 741 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms