RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 PHKG1Q16816 387 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 TTLL9Q3SXZ7 439 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 GGTA1PQ4G0N0 100 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 USP39Q53GS9 565 aaKnown RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 RETSATQ6NUM9 610 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 TMEM214Q6NUQ4 689 aaKnown RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 FAM151BQ6UXP7 276 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 Q6ZNX1 250 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 MSANTD1Q6ZTZ1 278 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 GPR149Q86SP6 731 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 METTL3Q86U44 580 aaKnown RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 STK32CQ86UX6 486 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 FAM9CQ8IZT9 166 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 NXPE1Q8N323 547 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 LIX1Q8N485 282 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 OR5K1Q8NHB7 308 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 ZNF461Q8TAF7 563 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 ADAMTS19Q8TE59 1207 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 TBC1D20Q96BZ9 403 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 CCDC97Q96F63 343 aaPredicted RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 MAGED4Q96JG8 741 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 COG8Q96MW5 612 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 MUS81Q96NY9 551 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 LYSMD1Q96S90 227 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 MBOAT4Q96T53 435 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 EGFL8Q99944 293 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 CPPED1Q9BRF8 314 aaPredicted RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 BOCQ9BWV1 1114 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 PAIP1Q9H074 479 aaKnown RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 KCNH6Q9H252 994 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 SOX17Q9H6I2 414 aaPredicted RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 IL26Q9NPH9 171 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 NMRK2Q9NPI5 230 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 HPS4Q9NQG7 708 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 TBCCD1Q9NVR7 557 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 FAM118AQ9NWS6 357 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 C1orf109Q9NX04 203 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 KCTD5Q9NXV2 234 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 SLC25A37Q9NYZ2 338 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 KLQ9UEF7 1012 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 ADGRE2Q9UHX3 823 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 ZMYM5Q9UJ78 669 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 ZNF490Q9ULM2 529 aaPredicted RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 FNDC3AQ9Y2H6 1198 aaKnown RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 KCNE1BA0A087WTH5 132 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 GLYATL1P3A0A0U1RQE8 302 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 SH3PXD2BA1X283 911 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 C16orf96A6NNT2 1141 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 G3V2T6 193 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 PITPNM1O00562 1244 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 WNT9AO14904 365 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 GPR39O43194 453 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 ULK1O75385 1050 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 SEC22BO75396 215 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 STK16O75716 305 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 DNAJB5O75953 348 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 TRIM16O95361 564 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 GUCA1CO95843 209 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 OLFM2O95897 454 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 KRT6AP02538 564 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 KRT6BP04259 564 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 PGRP06401 933 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 INHBBP09529 407 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 ACPPP15309 386 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 TCF3P15923 654 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 EPB42P16452 691 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 BPIP17213 487 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 ITGB6P18564 788 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 UGT1A1P22309 533 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 UGT1A4P22310 534 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 CRHBPP24387 322 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 GSTM2P28161 218 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 HOXD10P28358 340 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 UGT1A3P35503 534 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 UGT1A5P35504 534 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 HNF1BP35680 557 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 ARL1P40616 181 aaPredicted RBP9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 KRT6CP48668 564 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 ENTPD1P49961 510 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 GALK1P51570 392 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 SMAD3P84022 425 aaKnown RBP9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 PPP2R2BQ00005 443 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 IL18R1Q13478 541 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 GBX1Q14549 363 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 VEPH1Q14D04 833 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 PLCL1Q15111 1095 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 PON2Q15165 354 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 TAF12Q16514 161 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 AAK1Q2M2I8 961 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 PLA2G4EQ3MJ16 856 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 ZIK1Q3SY52 487 aaPredicted RBP9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 FAM174BQ3ZCQ3 159 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 ZC3H12BQ5HYM0 836 aaKnown RBP9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 HABP4Q5JVS0 413 aaKnown RBP9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 SPANXN4Q5MJ08 99 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 C6orf141Q5SZD1 244 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 OTUD3Q5T2D3 398 aaPredicted RBP9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 GPR107Q5VW38 600 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 KLHL35Q6PF15 583 aa9.41□□□□□ -0.9
IGHV3-54-201ENST00000622166 SUSD1Q6UWL2 747 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms