RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 KCTD14Q9BQ13 255 aaPredicted RBP17.13■□□□□ 0.33
FAM3A-222ENST00000621967 CD274Q9NZQ7 290 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 DYTNA2CJ06 578 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 FAM149AA5PLN7 773 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 GIPC1O14908 333 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 CLGNO14967 610 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 RASAL1O95294 804 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 ENO2P09104 434 aaPredicted RBP17.13■□□□□ 0.33
FAM3A-222ENST00000621967 NELFEP18615 380 aaKnown RBP17.13■□□□□ 0.33
FAM3A-222ENST00000621967 HTR1EP28566 365 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 IL12AP29459 219 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 ZP2Q05996 745 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 SLC36A3Q495N2 470 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 ZRANB3Q5FWF4 1079 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 TMTC4Q5T4D3 741 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 Q6ZSR9 355 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 ZFAND4Q86XD8 727 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 STK40Q8N2I9 435 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 SLC44A3Q8N4M1 653 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 DPP10Q8N608 796 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 ZNF557Q8N988 423 aaPredicted RBP17.13■□□□□ 0.33
FAM3A-222ENST00000621967 GRIN3AQ8TCU5 1115 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 PROKR1Q8TCW9 393 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 ADI1Q9BV57 179 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 HEBP1Q9NRV9 189 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 TUBA8Q9NY65 449 aaPredicted RBP17.13■□□□□ 0.33
FAM3A-222ENST00000621967 PTBP2Q9UKA9 531 aaKnown RBP17.13■□□□□ 0.33
FAM3A-222ENST00000621967 MYOFQ9NZM1 2061 aa17.13■□□□□ 0.33
FAM3A-222ENST00000621967 KANSL1LA0AUZ9 987 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 PDLIM1O00151 329 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 HOXC11O43248 304 aaPredicted RBP17.12■□□□□ 0.33
FAM3A-222ENST00000621967 TMCC1O94876 653 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 MTHFD1P11586 935 aaKnown RBP17.12■□□□□ 0.33
FAM3A-222ENST00000621967 ERVPABLB-1P60509 514 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 PLOD1Q02809 727 aaPredicted RBP17.12■□□□□ 0.33
FAM3A-222ENST00000621967 EMX2Q04743 252 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 MERTKQ12866 999 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 PCBP2Q15366 365 aaKnown RBP eCLIP17.12■□□□□ 0.33
FAM3A-222ENST00000621967 CYP51A1Q16850 503 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 ITPRIPL2Q3MIP1 535 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 RNF219Q5W0B1 726 aaPredicted RBP17.12■□□□□ 0.33
FAM3A-222ENST00000621967 NANOGP8Q6NSW7 305 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 SCIMPQ6UWF3 145 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 PRR23BQ6ZRT6 265 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 OR52B6Q8NGF0 335 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 ESAMQ96AP7 390 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 C1orf50Q9BV19 199 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 NANOGQ9H9S0 305 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 BPIFA1Q9NP55 256 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 LHX3Q9UBR4 397 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 SUN2Q9UH99 717 aa17.12■□□□□ 0.33
FAM3A-222ENST00000621967 OTOL1A6NHN0 477 aaPredicted RBP17.11■□□□□ 0.33
FAM3A-222ENST00000621967 INPP4BO15327 924 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 FZD6O60353 706 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 PCSK6P29122 969 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 AASDHQ4L235 1098 aaPredicted RBP17.11■□□□□ 0.33
FAM3A-222ENST00000621967 TIGD2Q4W5G0 525 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 ATP6AP1LQ52LC2 224 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 LETMD1Q6P1Q0 360 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 ZNF783Q6ZMS7 281 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 NAT16Q8N8M0 369 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 CDYL2Q8N8U2 506 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 TNIP2Q8NFZ5 429 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 INTS7Q9NVH2 962 aaKnown RBP17.11■□□□□ 0.33
FAM3A-222ENST00000621967 ETAA1Q9NY74 926 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 IL17CQ9P0M4 197 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 SLAMF8Q9P0V8 285 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 RSL24D1Q9UHA3 163 aaKnown RBP17.11■□□□□ 0.33
FAM3A-222ENST00000621967 ANAPC2Q9UJX6 822 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 OAZ3Q9UMX2 235 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 DHRS7Q9Y394 339 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 E5RI56 91 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 ARNTLO00327 626 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 SYNCRIPO60506 623 aaKnown RBP17.11■□□□□ 0.33
FAM3A-222ENST00000621967 TPST1O60507 370 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 GNAO1P09471 354 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 CDK9P50750 372 aaKnown RBP17.11■□□□□ 0.33
FAM3A-222ENST00000621967 CACNG1Q06432 222 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 PRKG2Q13237 762 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 PTPRRQ15256 657 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 TBC1D21Q8IYX1 336 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 CHCHD4Q8N4Q1 142 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 FNDC5Q8NAU1 212 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 ADAMTS16Q8TE57 1224 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 TMIGD2Q96BF3 282 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 TMEM74Q96NL1 305 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 MUC3BQ9H195 1237 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 CD320Q9NPF0 282 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 ZNF639Q9UID6 485 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 PCDHB1Q9Y5F3 818 aa17.11■□□□□ 0.33
FAM3A-222ENST00000621967 HRH2P25021 359 aa17.1■□□□□ 0.33
FAM3A-222ENST00000621967 TDGQ13569 410 aa17.1■□□□□ 0.33
FAM3A-222ENST00000621967 SBSNQ6UWP8 590 aa17.1■□□□□ 0.33
FAM3A-222ENST00000621967 ADAMTSL2Q86TH1 951 aa17.1■□□□□ 0.33
FAM3A-222ENST00000621967 IFNEQ86WN2 208 aa17.1■□□□□ 0.33
FAM3A-222ENST00000621967 PROSER1Q86XN7 944 aa17.1■□□□□ 0.33
FAM3A-222ENST00000621967 HID1Q8IV36 788 aa17.1■□□□□ 0.33
FAM3A-222ENST00000621967 SFRP1Q8N474 314 aa17.1■□□□□ 0.33
FAM3A-222ENST00000621967 FIBINQ8TAL6 211 aa17.1■□□□□ 0.33
FAM3A-222ENST00000621967 WFDC5Q8TCV5 224 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms