RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 PRAMEF17Q5VTA0 474 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 IFT81Q8WYA0 676 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 ZNF501Q96CX3 271 aaPredicted RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 IMP4Q96G21 291 aaKnown RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 SGSM3Q96HU1 749 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 LRFN5Q96NI6 719 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 TRIB3Q96RU7 358 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 SRPK1Q96SB4 655 aaKnown RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 SMAD5Q99717 465 aaKnown RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 TMBIM4Q9HC24 238 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 B3GNT3Q9Y2A9 372 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 HEY1Q9Y5J3 304 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 CNTRLQ7Z7A1 2325 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 POLEQ07864 2286 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 OR6C74A6NCV1 312 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 ANKUB1A6NFN9 424 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 F5H423 210 aaPredicted RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 AURKAO14965 403 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 CEP104O60308 925 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 POP7O75817 140 aaKnown RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 MT-CYBP00156 380 aaPredicted RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 CYP1A2P05177 515 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 ALPPP05187 535 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 RAB40ALP0C0E4 278 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 MTHFD1P11586 935 aaKnown RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 CYP2A7P20853 494 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 HMGCLP35914 325 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 HSD17B3P37058 310 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 ITGA1P56199 1179 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 GNGT1P63211 74 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 IFI35P80217 286 aaPredicted RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 DMPKQ09013 629 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 ABRQ12979 859 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 PRKAA1Q13131 559 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 ATP1A4Q13733 1029 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 PPP2R5EQ16537 467 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 PLEKHS1Q5SXH7 462 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 FAM182AQ5T1J6 154 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 VWA5B1Q5TIE3 1220 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 LYPLAL1Q5VWZ2 237 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 LCN10Q6JVE6 187 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 TICAM1Q8IUC6 712 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 KLHL7Q8IXQ5 586 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 SYTL1Q8IYJ3 562 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 DSELQ8IZU8 1212 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 CISD2Q8N5K1 135 aaKnown RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 PQLC3Q8N755 202 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 RASGEF1AQ8N9B8 481 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 FAF2Q96CS3 445 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 ATP6V1G3Q96LB4 118 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 C12orf66Q96MD2 445 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 ILKAPQ9H0C8 392 aaPredicted RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 RASSF4Q9H2L5 321 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 LATS2Q9NRM7 1088 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 ASF1BQ9NVP2 202 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 TMPRSS11EQ9UL52 423 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 SVILO95425 2214 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 HMGB1P1B2RPK0 211 aaPredicted RBP7.61□□□□□ -1.19
CLK1-215ENST00000621181 TMEM150CB9EJG8 249 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 C9J4A7 227 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 GPR39O43194 453 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 PMPCBO75439 489 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 CBX6O95503 412 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 NDST3O95803 873 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 CDH3P22223 829 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 AKT1P31749 480 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 ARCN1P48444 511 aaKnown RBP7.61□□□□□ -1.19
CLK1-215ENST00000621181 KPNA2P52292 529 aaKnown RBP7.61□□□□□ -1.19
CLK1-215ENST00000621181 CTSCP53634 463 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 ZNF844Q08AG5 666 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 KRT33BQ14525 404 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 PTCHD3Q3KNS1 767 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 PLEKHN1Q494U1 663 aaPredicted RBP7.61□□□□□ -1.19
CLK1-215ENST00000621181 LDLRAP1Q5SW96 308 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 FNBP1LQ5T0N5 605 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 ZDHHC20Q5W0Z9 365 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 TMEM220Q6QAJ8 160 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 FAM151BQ6UXP7 276 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 FAM83HQ6ZRV2 1179 aaPredicted RBP7.61□□□□□ -1.19
CLK1-215ENST00000621181 PEX26Q7Z412 305 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 CPNE8Q86YQ8 564 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 RAB43Q86YS6 212 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 SRRM1Q8IYB3 904 aaKnown RBP7.61□□□□□ -1.19
CLK1-215ENST00000621181 C10orf67Q8IYJ2 551 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 SYCE1Q8N0S2 351 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 CARFQ8N187 725 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 BEND7Q8N7W2 519 aaPredicted RBP7.61□□□□□ -1.19
CLK1-215ENST00000621181 GLIS1Q8NBF1 620 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 CLEC1AQ8NC01 280 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 SPATA22Q8NHS9 363 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 SLC35G2Q8TBE7 412 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 PPM1MQ96MI6 270 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 AP1M1Q9BXS5 423 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 DDX47Q9H0S4 455 aaKnown RBP7.61□□□□□ -1.19
CLK1-215ENST00000621181 SLC25A51Q9H1U9 297 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 KIR3DX1Q9H7L2 352 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 ACTR5Q9H9F9 607 aaPredicted RBP7.61□□□□□ -1.19
CLK1-215ENST00000621181 IL26Q9NPH9 171 aa7.61□□□□□ -1.19
CLK1-215ENST00000621181 UBP1Q9NZI7 540 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms