RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 GPR17Q13304 367 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 SLBPQ14493 270 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLIP1-219ENST00000620786 GFOD2Q3B7J2 385 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 MTX3Q5HYI7 312 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 ZSCAN1Q8NBB4 408 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 CAMKVQ8NCB2 501 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 ZNF461Q8TAF7 563 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 IGSF21Q96ID5 467 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 MTERF1Q99551 399 aaKnown RBP11.18□□□□□ -0.62
CLIP1-219ENST00000620786 TBL1XR1Q9BZK7 514 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 STRADBQ9C0K7 418 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 LDAHQ9H6V9 325 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 CHMP1AQ9HD42 196 aaPredicted RBP11.18□□□□□ -0.62
CLIP1-219ENST00000620786 CA14Q9ULX7 337 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 DMTF1Q9Y222 760 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 RUVBL1Q9Y265 456 aaKnown RBP11.18□□□□□ -0.62
CLIP1-219ENST00000620786 BTBD3Q9Y2F9 522 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 C2orf71A6NGG8 1288 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 OR51F1A6NGY5 319 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 FADS2P1A8MWK0 482 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 KCNE1P15382 129 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 SLC7A1P30825 629 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 MPIP34949 423 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 PPIDQ08752 370 aaKnown RBP11.18□□□□□ -0.62
CLIP1-219ENST00000620786 HKDC1Q2TB90 917 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 FRRS1Q6ZNA5 592 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 TBC1D21Q8IYX1 336 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 KAT2AQ92830 837 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 KCND1Q9NSA2 647 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 C1orf109Q9NX04 203 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 ZNF180Q9UJW8 692 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 ZNF823P16415 610 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 GNALP38405 381 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 C22orf39Q6P5X5 142 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 TMEM126BQ8IUX1 230 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 TBC1D10AQ9BXI6 508 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 CXorf56Q9H5V9 222 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 SERINC1Q9NRX5 453 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 MON2Q7Z3U7 1717 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 J3KR12 359 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 SSNA1O43805 119 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 PCDH7O60245 1069 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 HCN1O60741 890 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 STATHP02808 62 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 RPL10P27635 214 aaKnown RBP11.18□□□□□ -0.62
CLIP1-219ENST00000620786 ARCN1P48444 511 aaKnown RBP11.18□□□□□ -0.62
CLIP1-219ENST00000620786 CDK9P50750 372 aaKnown RBP11.18□□□□□ -0.62
CLIP1-219ENST00000620786 SLC10A7Q0GE19 358 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 COL9A3Q14050 684 aaPredicted RBP11.18□□□□□ -0.62
CLIP1-219ENST00000620786 TOR1AIP1Q5JTV8 583 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 KIAA0930Q6ICG6 404 aaPredicted RBP11.18□□□□□ -0.62
CLIP1-219ENST00000620786 CXorf57Q6NSI4 855 aaKnown RBP11.18□□□□□ -0.62
CLIP1-219ENST00000620786 OSTM1Q86WC4 334 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 NUDT13Q86X67 352 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 ZNF527Q8NB42 609 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 OR4E2Q8NGC2 313 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 SETD6Q8TBK2 473 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 FAM110BQ8TC76 370 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 TRIB2Q92519 343 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 SPOCK2Q92563 424 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 KLHDC7BQ96G42 594 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 SMOC2Q9H3U7 446 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 DSN1Q9H410 356 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 NOL6Q9H6R4 1146 aaKnown RBP11.18□□□□□ -0.62
CLIP1-219ENST00000620786 PIGVQ9NUD9 493 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 DMAC2Q9NW81 257 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 MED31Q9Y3C7 131 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 DGKBQ9Y6T7 804 aa11.18□□□□□ -0.62
CLIP1-219ENST00000620786 CHST10O43529 356 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 ALOX5P09917 674 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 PBX1P40424 430 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 IL12RB1P42701 662 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 GDF10P55107 478 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 NFKB2Q00653 900 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 KLF10Q13118 480 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 MYBPC3Q14896 1274 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 MAPK15Q8TD08 544 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 KIAA1143Q96AT1 154 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 ADAP2Q9NPF8 381 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 TAC3Q9UHF0 121 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 KCNK6Q9Y257 313 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 FAM25EA8MYX2 175 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 EDF1O60869 148 aaKnown RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 KRT36O76013 467 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 CAPGP40121 348 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 SLC26A3P40879 764 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 YAP1P46937 504 aaKnown RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 ARL13AQ5H913 290 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 PDE12Q6L8Q7 609 aaKnown RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 ADGRD1Q6QNK2 874 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 FAR1Q8WVX9 515 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 RGMAQ96B86 450 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 PLGRKTQ9HBL7 147 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 CCNB1IP1Q9NPC3 277 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 C9JVG2 144 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 K7EPI3 171 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 RNF225M0QZC1 329 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 PGRMC2O15173 223 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 LAMTOR5O43504 91 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 KDELR3O43731 214 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms