RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 MATN3O15232 486 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 ANGPTL1O95841 491 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 BPNT1O95861 308 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 CCNE2O96020 404 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 PGRP06401 933 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 MTHFD1P11586 935 aaKnown RBP10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 MAP3K8P41279 467 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 SNTA1Q13424 505 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 GPR65Q8IYL9 337 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 CD99L2Q8TCZ2 262 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 ERMAPQ96PL5 475 aaPredicted RBP10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 KXD1Q9BQD3 176 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 NEMP2A6NFY4 417 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 IRAK2O43187 625 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 NCBP2P52298 156 aaKnown RBP eCLIP10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 BTN3A2P78410 334 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 OC90Q02509 493 aaPredicted RBP10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 XYLT1Q86Y38 959 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 SPPL2CQ8IUH8 684 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 NXPE1Q8N323 547 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 FAM47BQ8NA70 645 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 TRPM4Q8TD43 1214 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 RFT1Q96AA3 541 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 IFT27Q9BW83 186 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 CFL2Q9Y281 166 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 CPN2P22792 545 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 DGKGP49619 791 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 RHBDL3P58872 404 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 CLCQ05315 142 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 ABHD15Q6UXT9 468 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 OTOP3Q7RTS5 596 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 CCDC107Q8WV48 283 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 PMM1Q92871 262 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 CAMK1GQ96NX5 476 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 SLC39A3Q9BRY0 314 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 MFSD11O43934 449 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 RFWD3Q6PCD5 774 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 DNAJB8Q8NHS0 232 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 PURBQ96QR8 312 aaKnown RBP10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 B3GNT5Q9BYG0 378 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 SMURF1Q9HCE7 757 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 MKKSQ9NPJ1 570 aaPredicted RBP10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 SMPD3Q9NY59 655 aaPredicted RBP10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 TCAF1Q9Y4C2 921 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 TAS2R40P59535 323 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 CHIT1Q13231 466 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 PGAM4Q8N0Y7 254 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 PDPRQ8NCN5 879 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 RGMAQ96B86 450 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 LRRC4CQ9HCJ2 640 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 PNPOQ9NVS9 261 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 LYARQ9NX58 379 aaKnown RBP10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 L7N2F9 121 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 ARL3P36405 182 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 VAMP2P63027 116 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 SLC25A25Q6KCM7 469 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 USP30Q70CQ3 517 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 GIPC3Q8TF64 312 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 CERS4Q9HA82 394 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 RUVBL1Q9Y265 456 aaKnown RBP10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 CILPO75339 1184 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 KLK3P07288 261 aaPredicted RBP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 PGAM2P15259 253 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 FSHRP23945 695 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 PRMT2P55345 433 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 NATD1Q8N6N6 113 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 LNX1Q8TBB1 728 aaPredicted RBP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 PCED1BQ96HM7 432 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 KAZALD1Q96I82 304 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 HAPLN3Q96S86 360 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 GPR20Q99678 358 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 SPIN1Q9Y657 262 aaPredicted RBP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 TLL2Q9Y6L7 1015 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 TPST2O60704 377 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 TRMUO75648 421 aaKnown RBP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 MT-CYBP00156 380 aaPredicted RBP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 ESR1P03372 595 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 CXCR1P25024 350 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 UGT1A3P35503 534 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 GBX2P52951 348 aaPredicted RBP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 FPGSQ05932 587 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 CHAF1BQ13112 559 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 ZNF234Q14588 700 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 UGCGQ16739 394 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 ALG10Q5BKT4 473 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 SNIP1Q8TAD8 396 aaKnown RBP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 DNAJC19Q96DA6 116 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 B3GNT4Q9C0J1 378 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 LGR5O75473 907 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 KRT36O76013 467 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 ZBTB11O95625 1053 aaPredicted RBP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 GOT2P00505 430 aaKnown RBP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 MPSTP25325 297 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 EIF5AP63241 154 aaKnown RBP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 NOMO1Q15155 1222 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 REP15Q6BDI9 236 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 AHSA2Q719I0 299 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 PXDNQ92626 1479 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 MON2Q7Z3U7 1717 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 C2P06681 752 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms