RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 OPTCQ9UBM4 332 aa11.57□□□□□ -0.56
C11orf54-215ENST00000617482 DNAJB9Q9UBS3 223 aa11.57□□□□□ -0.56
C11orf54-215ENST00000617482 INVSQ9Y283 1065 aa11.57□□□□□ -0.56
C11orf54-215ENST00000617482 PCDHB1Q9Y5F3 818 aa11.57□□□□□ -0.56
C11orf54-215ENST00000617482 LAMA3Q16787 3333 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 GBF1Q92538 1859 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 ELOVL7A1L3X0 281 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 LOC730098B7Z3J9 87 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 H7C4K7 107 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 ARVCFO00192 962 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 CXCR6O00574 342 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 TBL1XO60907 577 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 GSNP06396 782 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 GALTP07902 379 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 NR4A1P22736 598 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 GNPDA1P46926 289 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 RGS4P49798 205 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 C21orf59P57076 290 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 SEMG2Q02383 582 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 GRSF1Q12849 480 aaKnown RBP eCLIP11.56□□□□□ -0.56
C11orf54-215ENST00000617482 BFSP2Q13515 415 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 ZNF829Q3KNS6 432 aaPredicted RBP11.56□□□□□ -0.56
C11orf54-215ENST00000617482 SUSD1Q6UWL2 747 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 Q6ZNX1 250 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 CHST9Q7L1S5 443 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 RGL4Q8IZJ4 473 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 CACTIN-AS1Q8N1I8 211 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 OR52E6Q96RD3 313 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 MBOAT4Q96T53 435 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 FEM1AQ9BSK4 669 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 CD244Q9BZW8 370 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 TBC1D23Q9NUY8 699 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 CHD5Q8TDI0 1954 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 C1orf232A0A0U1RR37 186 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 PTGES3LE9PB15 166 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 J3QRK9 145 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 GAPDHSO14556 408 aaPredicted RBP11.56□□□□□ -0.56
C11orf54-215ENST00000617482 FZD6O60353 706 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 ABCB7O75027 752 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 SEC14L2O76054 403 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 GLUD1P00367 558 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 AGXTP21549 392 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 CST5P28325 142 aaPredicted RBP11.56□□□□□ -0.56
C11orf54-215ENST00000617482 BMXP51813 675 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 SMARCB1Q12824 385 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 CTU2Q2VPK5 515 aaKnown RBP11.56□□□□□ -0.56
C11orf54-215ENST00000617482 ARMC12Q5T9G4 340 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 CERS6Q6ZMG9 384 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 SPARTQ8N0X7 666 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 C10orf111Q8N326 155 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 AADATQ8N5Z0 425 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 ZNF555Q8NEP9 628 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 FRS2Q8WU20 508 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 PLD4Q96BZ4 506 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 ULK4Q96C45 1275 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 FBXL8Q96CD0 374 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 CCDC115Q96NT0 180 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 CSF3RQ99062 836 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 OSBPL10Q9BXB5 764 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 DGCR6LQ9BY27 220 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 ABCG8Q9H221 673 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 RETREG1Q9H6L5 497 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 ZFYVE1Q9HBF4 777 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 MAGEE1Q9HCI5 957 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 IL26Q9NPH9 171 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 LATS2Q9NRM7 1088 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 LRFN2Q9ULH4 789 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 OARD1Q9Y530 152 aa11.56□□□□□ -0.56
C11orf54-215ENST00000617482 LAMA2P24043 3122 aaKnown RBP11.56□□□□□ -0.56
C11orf54-215ENST00000617482 HS6ST1O60243 411 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 E2F6O75461 281 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 CLDN7O95471 211 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 SEC24AO95486 1093 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 ZBTB11O95625 1053 aaPredicted RBP11.55□□□□□ -0.56
C11orf54-215ENST00000617482 B3GALT4O96024 378 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 HMGA1P17096 107 aaKnown RBP11.55□□□□□ -0.56
C11orf54-215ENST00000617482 PSMD7P51665 324 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 TMBIM6P55061 237 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 KCNAB2Q13303 367 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 NFATC2Q13469 925 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 ARHGEF7Q14155 803 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 CBX2Q14781 532 aaPredicted RBP11.55□□□□□ -0.56
C11orf54-215ENST00000617482 CPSF6Q16630 551 aaKnown RBP eCLIP11.55□□□□□ -0.56
C11orf54-215ENST00000617482 C6orf141Q5SZD1 244 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 CACHD1Q5VU97 1274 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 TTC23Q5W5X9 447 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 C16orf87Q6PH81 154 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 TMEM179BQ7Z7N9 219 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 RBM23Q86U06 439 aaKnown RBP11.55□□□□□ -0.56
C11orf54-215ENST00000617482 ANKRD46Q86W74 232 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 WFDC5Q8TCV5 224 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 NETO1Q8TDF5 533 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 PIH1D2Q8WWB5 315 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 BORCS5Q969J3 196 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 RHBDF1Q96CC6 855 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 NRBF2Q96F24 287 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 MYO19Q96H55 970 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 PLEKHA8Q96JA3 519 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 CWH43Q9H720 699 aa11.55□□□□□ -0.56
C11orf54-215ENST00000617482 LRTM1Q9HBL6 345 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms