RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 STX5Q13190 355 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 NR6A1Q15406 480 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 CADM3Q8N126 398 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 CHST14Q8NCH0 376 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 OR10Q1Q8NGQ4 319 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 CAPSLQ8WWF8 208 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 FUBP1Q96AE4 644 aaKnown RBP14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 CCDC126Q96EE4 140 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 MYOCQ99972 504 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 ING2Q9H160 280 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 MED16Q9Y2X0 877 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 ANTXRLA6NF34 631 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 SLCO1B7G3V0H7 640 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 KPNA4O00629 521 aaPredicted RBP14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 NPHS1O60500 1241 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 PCNAP12004 261 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 IDUAP35475 653 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 ZNF140P52738 457 aaPredicted RBP14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 ERVFC1P60507 584 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 ABRAXAS1Q6UWZ7 409 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 GET4Q7L5D6 327 aaPredicted RBP14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 SYVN1Q86TM6 617 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 DHRSXQ8N5I4 330 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 HMGCLL1Q8TB92 370 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 ULK4Q96C45 1275 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 PPM1MQ96MI6 270 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 TRIB3Q96RU7 358 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 FARSBQ9NSD9 589 aaKnown RBP14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 PKD2L2Q9NZM6 624 aa14.21□□□□□ -0.13
SHROOM1-208ENST00000617339 ABHD14A-ACY1A0A1B0GW23 586 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 LCHNA4D1U4 455 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 PSMD11O00231 422 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 INPP4BO15327 924 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 HSPA8P11142 646 aaKnown RBP14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 MAGP20916 626 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 OXTRP30559 389 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 CCR2P41597 374 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 NEK2P51955 445 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 HK3P52790 923 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 CTSL3PQ5NE16 218 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 RNF175Q8N4F7 328 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 OR2T34Q8NGX1 318 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 OR2T3Q8NH03 318 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 SMG7Q92540 1137 aaKnown RBP14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 ATG10Q9H0Y0 220 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 EHD1Q9H4M9 534 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 IFT80Q9P2H3 777 aaPredicted RBP14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 MBD1Q9UIS9 605 aaPredicted RBP14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 ZNF229Q9UJW7 825 aa14.21□□□□□ -0.14
SHROOM1-208ENST00000617339 SCAMP1O15126 338 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 INHBBP09529 407 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 DCKP27707 260 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 TPD52P55327 224 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 FPGSQ05932 587 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 RETREG3Q86VR2 466 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 SLC39A11Q8N1S5 342 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 HJURPQ8NCD3 748 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 CDK5RAP1Q96SZ6 601 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 TMEM175Q9BSA9 504 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 TBCDQ9BTW9 1192 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 MRM3Q9HC36 420 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 WWOXQ9NZC7 414 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 KLQ9UEF7 1012 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 CDH7Q9ULB5 785 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 DHRS12A0PJE2 317 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 PLK4O00444 970 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 STK25O00506 426 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 DLGAP1O14490 977 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 XYLBO75191 536 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 LRATO95237 230 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 SLC2A4P14672 509 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 IL10P22301 178 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 TTPAP49638 278 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 WDR5P61964 334 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 SETMARQ53H47 684 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 CCDC149Q6ZUS6 474 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 ERMP1Q7Z2K6 904 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 ZSWIM9Q86XI8 627 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 CPSF7Q8N684 471 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 CCDC90BQ9GZT6 254 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 TPK1Q9H3S4 243 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 POLG2Q9UHN1 485 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 TBC1D3BA6NDS4 549 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 SOBPA7XYQ1 873 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 PRMT5O14744 637 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 MYO1DO94832 1006 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 PAPSS2O95340 614 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 MYF6P23409 242 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 FASP25445 335 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 NFYCQ13952 458 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 TEAD2Q15562 447 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 PHKG1Q16816 387 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 IMPG1Q17R60 797 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 CYHR1Q6ZMK1 362 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 C2orf73Q8N5S3 287 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 PLD4Q96BZ4 506 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 IL26Q9NPH9 171 aa14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 INTS6Q9UL03 887 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-208ENST00000617339 MIA3Q5JRA6 1907 aa14.19□□□□□ -0.14
SHROOM1-208ENST00000617339 CHEK2O96017 543 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms