RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	UROD	P06132	367 aa		13.62	□□□□□ -0.23
CACNA1C-231	ENST00000616390	HSPA14	Q0VDF9	509 aa		13.62	□□□□□ -0.23
CACNA1C-231	ENST00000616390	CMTM8	Q8IZV2	173 aa		13.62	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ESX1	Q8N693	406 aa		13.62	□□□□□ -0.23
CACNA1C-231	ENST00000616390	GPR26	Q8NDV2	337 aa		13.62	□□□□□ -0.23
CACNA1C-231	ENST00000616390	OR10A6	Q8NH74	314 aa		13.62	□□□□□ -0.23
CACNA1C-231	ENST00000616390	NSMCE2	Q96MF7	247 aa		13.62	□□□□□ -0.23
CACNA1C-231	ENST00000616390	LRRC3	Q9BY71	257 aa		13.62	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ANKRD60	Q9BZ19	345 aa		13.62	□□□□□ -0.23
CACNA1C-231	ENST00000616390	CLK4	Q9HAZ1	481 aa	Known RBP	13.62	□□□□□ -0.23
CACNA1C-231	ENST00000616390	VAPA	Q9P0L0	249 aa		13.62	□□□□□ -0.23
CACNA1C-231	ENST00000616390	DMTF1	Q9Y222	760 aa		13.62	□□□□□ -0.23
CACNA1C-231	ENST00000616390	TCRBV5S2	A0A599	114 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	LDLR	P01130	860 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	DGKA	P23743	735 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ACRV1	P26436	265 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	EMX2	Q04743	252 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	FOXM1	Q08050	763 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	COX10	Q12887	443 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	DYNC1I2	Q13409	638 aa	Known RBP	13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	DLEU7	Q6UYE1	221 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	CERS6	Q6ZMG9	384 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	SLC22A15	Q8IZD6	547 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	LIX1	Q8N485	282 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	DTWD1	Q8N5C7	304 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	OR10Q1	Q8NGQ4	319 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	GFM2	Q969S9	779 aa	Known RBP	13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	RBM38	Q9H0Z9	239 aa	Known RBP	13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	CIDEB	Q9UHD4	219 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	TRIM17	Q9Y577	477 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	MICAL3	Q7RTP6	2002 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390		A0A1W2PRU2	124 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390		H0YJX3	145 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	GSTA4	O15217	222 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ACOX3	O15254	700 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ULK1	O75385	1050 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	GSN	P06396	782 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	SLC5A2	P31639	672 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	RFC2	P35250	354 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	IST1	P53990	364 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	AASDH	Q4L235	1098 aa	Predicted RBP	13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	DCAF4L2	Q8NA75	395 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	CGREF1	Q99674	301 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	BEGAIN	Q9BUH8	593 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ZDHHC6	Q9H6R6	413 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	PREB	Q9HCU5	417 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	MBD1	Q9UIS9	605 aa	Predicted RBP	13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	FADS3	Q9Y5Q0	445 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	CEPT1	Q9Y6K0	416 aa		13.61	□□□□□ -0.23
CACNA1C-231	ENST00000616390	TMEM247	A6NEH6	219 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	TEX28	O15482	410 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	GPI	P06744	558 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ADAR	P55265	1226 aa	Known RBP	13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	AP1S1	P61966	158 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	LAPTM5	Q13571	262 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ATP6AP1	Q15904	470 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	GTDC1	Q4AE62	458 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	COQ5	Q5HYK3	327 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	SPANXN4	Q5MJ08	99 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	TPGS2	Q68CL5	300 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	GAREM2	Q75VX8	874 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	LPCAT2	Q7L5N7	544 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ANKRD46	Q86W74	232 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	PHACTR4	Q8IZ21	702 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ITFG1	Q8TB96	612 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ZNF558	Q96NG5	402 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	EPB41L1	Q9H4G0	881 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ATP13A3	Q9H7F0	1226 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ABCB8	Q9NUT2	735 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ARL15	Q9NXU5	204 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	LSM7	Q9UK45	103 aa	Known RBP	13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	PTBP2	Q9UKA9	531 aa	Known RBP	13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	UPK3BL1	B0FP48	263 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	UPK3BL2	E5RIL1	263 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	GREM1	O60565	184 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	GMNN	O75496	209 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	B3GALT4	O96024	378 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	CDH2	P19022	906 aa	Predicted RBP	13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	PSMA3	P25788	255 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	EEFSEC	P57772	596 aa	Known RBP	13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	DEFB103A	P81534	67 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	TLE2	Q04725	743 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	TMTC4	Q5T4D3	741 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	LRRC66	Q68CR7	880 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	KRT77	Q7Z794	578 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	TMEM151B	Q8IW70	566 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	RGL4	Q8IZJ4	473 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	DHRSX	Q8N5I4	330 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	FAM86B1	Q8N7N1	296 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	ZFPM2	Q8WW38	1151 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	AURKB	Q96GD4	344 aa	Predicted RBP	13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	TRMT2B	Q96GJ1	504 aa	Known RBP	13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	CD244	Q9BZW8	370 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	DPY30	Q9C005	99 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	PTTG2	Q9NZH5	202 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	UTS2R	Q9UKP6	389 aa		13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390	INTS6	Q9UL03	887 aa	Known RBP	13.6	□□□□□ -0.23
CACNA1C-231	ENST00000616390		A0A0B4J203	849 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms