RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PABPN1LA6NDY0 278 aaKnown RBP14.34□□□□□ -0.11
CD48-203ENST00000613788 OR52A4PA6NMU1 304 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 CDX4O14627 284 aaPredicted RBP14.34□□□□□ -0.11
CD48-203ENST00000613788 GLRA3O75311 464 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 PSIP1O75475 530 aaKnown RBP14.34□□□□□ -0.11
CD48-203ENST00000613788 VIPP01282 170 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 RBP1P09455 135 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 GIMD1P0DJR0 217 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 TFEBP19484 476 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 CYP2A7P20853 494 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 TGM1P22735 817 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 MAP4P27816 1152 aaKnown RBP14.34□□□□□ -0.11
CD48-203ENST00000613788 CRHR1P34998 444 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 DLG1Q12959 904 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 GPS2Q13227 327 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 BIRC2Q13490 618 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 DBX2Q6ZNG2 339 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 ADAMTSL2Q86TH1 951 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 PLD6Q8N2A8 252 aaKnown RBP14.34□□□□□ -0.11
CD48-203ENST00000613788 MCOLN3Q8TDD5 553 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 ZFPM2Q8WW38 1151 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 KIAA1191Q96A73 305 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 ATP6V1G3Q96LB4 118 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 SLC12A9Q9BXP2 914 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 IQCGQ9H095 443 aaKnown RBP14.34□□□□□ -0.11
CD48-203ENST00000613788 PARVBQ9HBI1 364 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 MKS1Q9NXB0 559 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 SIRPGQ9P1W8 387 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 ZNF624Q9P2J8 865 aaPredicted RBP14.34□□□□□ -0.11
CD48-203ENST00000613788 POLG2Q9UHN1 485 aa14.34□□□□□ -0.11
CD48-203ENST00000613788 CFAP20Q9Y6A4 193 aaKnown RBP14.34□□□□□ -0.11
CD48-203ENST00000613788 CDC7O00311 574 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 KDM1AO60341 852 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 C1orf105O95561 183 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 ENO2P09104 434 aaPredicted RBP14.33□□□□□ -0.12
CD48-203ENST00000613788 HIST1H2AGP0C0S8 130 aaPredicted RBP14.33□□□□□ -0.12
CD48-203ENST00000613788 HIST1H2ADP20671 130 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 GMPRP36959 345 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 SLC19A1P41440 591 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 GRK6P43250 576 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 RPIAP49247 311 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 MAGOHP61326 146 aaKnown RBP14.33□□□□□ -0.12
CD48-203ENST00000613788 C14orf28Q4W4Y0 310 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 HSP90B2PQ58FF3 399 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 ISCA2Q86U28 154 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 RASGRP3Q8IV61 690 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 DCUN1D3Q8IWE4 304 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 RBM12BQ8IXT5 1001 aaKnown RBP14.33□□□□□ -0.12
CD48-203ENST00000613788 EID2Q8N6I1 236 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 ARL10Q8N8L6 244 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 BANPQ8N9N5 519 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 FBXO15Q8NCQ5 510 aaPredicted RBP14.33□□□□□ -0.12
CD48-203ENST00000613788 PHC3Q8NDX5 983 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 GPR156Q8NFN8 814 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 OR5K2Q8NHB8 316 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 RHEBL1Q8TAI7 183 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 SLC37A2Q8TED4 501 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 PATE1Q8WXA2 126 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 RAD51AP1Q96B01 352 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 ARL8AQ96BM9 186 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 TLCD1Q96CP7 247 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 APOPT1Q96IL0 206 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 SCYL1Q96KG9 808 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 HIST1H2AHQ96KK5 128 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 GPR78Q96P69 363 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 HIST1H2AJQ99878 128 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 H2AFJQ9BTM1 129 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 UNKQ9C0B0 810 aaKnown RBP14.33□□□□□ -0.12
CD48-203ENST00000613788 SSU72Q9NP77 194 aaKnown RBP14.33□□□□□ -0.12
CD48-203ENST00000613788 POT1Q9NUX5 634 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 NCKIPSDQ9NZQ3 722 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 CPNE7Q9UBL6 633 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 TDRD6O60522 2096 aaKnown RBP14.33□□□□□ -0.12
CD48-203ENST00000613788 LAMA1P25391 3075 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 GPR179Q6PRD1 2367 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 TMEM131Q92545 1883 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 ADAMTS9Q9P2N4 1935 aa14.33□□□□□ -0.12
CD48-203ENST00000613788 TP53BP1Q12888 1972 aaPredicted RBP14.32□□□□□ -0.12
CD48-203ENST00000613788 NPEPPSL1A6NEC2 478 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 HMGB1P1B2RPK0 211 aaPredicted RBP14.32□□□□□ -0.12
CD48-203ENST00000613788 TRIM38O00635 465 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 FLRT2O43155 660 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 NOBOXO60393 691 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 FASLGP48023 281 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 GLRBP48167 497 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 TSNQ15631 228 aaKnown RBP14.32□□□□□ -0.12
CD48-203ENST00000613788 FRA10AC1Q70Z53 315 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 ASCL5Q7RTU5 278 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 C17orf82Q86X59 251 aaPredicted RBP14.32□□□□□ -0.12
CD48-203ENST00000613788 GPSM1Q86YR5 675 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 ARL14Q8N4G2 192 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 FAM181AQ8N9Y4 354 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 OR5AR1Q8NGP9 310 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 SH3KBP1Q96B97 665 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 PHOX2BQ99453 314 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 MRPL57Q9BQC6 102 aaKnown RBP14.32□□□□□ -0.12
CD48-203ENST00000613788 ALG9Q9H6U8 611 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 RXFP3Q9NSD7 469 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 ZNF358Q9NW07 568 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 TMEM216Q9P0N5 145 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms