RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 NPAS4Q8IUM7 802 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 IQCF2Q8IXL9 164 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 HIPK3Q9H422 1215 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 COQ10BQ9H8M1 238 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 CST3P01034 146 aaPredicted RBP17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 COL6A1P12109 1028 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 ATP5A1P25705 553 aaKnown RBP17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 CRISP3P54108 245 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 MAZP56270 477 aaKnown RBP17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 PDCD4Q53EL6 469 aaKnown RBP17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 SMYD5Q6GMV2 418 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 ZNF613Q6PF04 617 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 GALNT7Q86SF2 657 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 GTF2IRD1Q9UHL9 959 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 CNOT6Q9ULM6 557 aaKnown RBP17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 SCAMP3O14828 347 aaKnown RBP17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 GAD2Q05329 585 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 FAM189A2Q15884 450 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 FBXO22Q8NEZ5 403 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 OR6K2Q8NGY2 324 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 PSKH2Q96QS6 385 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 PADI3Q9ULW8 664 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 POMPQ9Y244 141 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 PLOD2O00469 737 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 ARCN1P48444 511 aaKnown RBP17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 PAOXQ6QHF9 649 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 GRHL1Q9NZI5 618 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 K7EPI3 171 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 AGRPO00253 132 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 B3GALT2O43825 422 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 GSTM3P21266 225 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 TCEAL6Q6IPX3 200 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 CHADLQ6NUI6 762 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 FUT10Q6P4F1 479 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 OR8H3Q8N146 312 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 CADM2Q8N3J6 435 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 NR4A3Q92570 626 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 ZNF570Q96NI8 536 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 NTPCRQ9BSD7 190 aaKnown RBP17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 NMUR1Q9HB89 426 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 TCRBV7S2A1N4TA0A589 114 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 WNT7AO00755 349 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 PPP1R11O60927 126 aaPredicted RBP17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 PEPDP12955 493 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 IMPDH1P20839 514 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 NDUFV1P49821 464 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 CAP1Q01518 475 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 PLEKHA1Q9HB21 404 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 ZNF304Q9HCX3 659 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 IFT46Q9NQC8 304 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 MLXQ9UH92 298 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 EFCAB9A8MZ26 197 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 MID1O15344 667 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 PRPS1L1P21108 318 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 SLC6A4P31645 630 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 HERVK_113P63132 956 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 HSDL1Q3SXM5 330 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 SLC9A4Q6AI14 798 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 FRMD6Q96NE9 622 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 DUSP26Q9BV47 211 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 ERVK-6Q9BXR3 956 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 MKLN1Q9UL63 735 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 HCN1O60741 890 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 CYB5AP00167 134 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 PCDH1Q08174 1060 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 FASTKD3Q14CZ7 662 aaKnown RBP17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 PLCZ1Q86YW0 608 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 OR10A6Q8NH74 314 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 RC3H2Q9HBD1 1191 aaKnown RBP17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 ANKHQ9HCJ1 492 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 ASB3Q9Y575 518 aa17.12■□□□□ 0.33
HMGXB3-206ENST00000613459 C8BP07358 591 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 CHRNB2P17787 502 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 EIF2S3P41091 472 aaKnown RBP17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 PLA2G4EQ3MJ16 856 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 FBXO43Q4G163 708 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 MBOAT1Q6ZNC8 495 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 CFAP206Q8IYR0 622 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 ZIM2Q9NZV7 527 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 EIF2B4Q9UI10 523 aaKnown RBP17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 IRAK2O43187 625 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 UNGP13051 313 aaPredicted RBP17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 AVPR1BP47901 424 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 TPTEP56180 551 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 COL9A3Q14050 684 aaPredicted RBP17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 GPR152Q8TDT2 470 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 PCED1BQ96HM7 432 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 COPS4Q9BT78 406 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 EFCAB11Q9BUY7 163 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 ITM2CQ9NQX7 267 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 TSPAN4O14817 238 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 OR1F1O43749 312 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 ALPPP05187 535 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 PTPN2P17706 415 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 ATF4P18848 351 aaPredicted RBP17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 TREML2Q5T2D2 321 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 LRRC70Q7Z2Q7 622 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 NUP54Q7Z3B4 507 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 LCN9Q8WX39 176 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 SLC22A18Q96BI1 424 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms