RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 TTC27Q6P3X3 843 aa18.73■□□□□ 0.59
SGMS1-208ENST00000608287 OR2L2Q8NH16 312 aa18.73■□□□□ 0.59
SGMS1-208ENST00000608287 COG1Q8WTW3 980 aa18.73■□□□□ 0.59
SGMS1-208ENST00000608287 RANBP9Q96S59 729 aa18.73■□□□□ 0.59
SGMS1-208ENST00000608287 POT1Q9NUX5 634 aa18.73■□□□□ 0.59
SGMS1-208ENST00000608287 LNPEPQ9UIQ6 1025 aa18.73■□□□□ 0.59
SGMS1-208ENST00000608287 SNX12Q9UMY4 172 aa18.73■□□□□ 0.59
SGMS1-208ENST00000608287 CRYBG3Q68DQ2 2970 aa18.73■□□□□ 0.59
SGMS1-208ENST00000608287 TNRC6AQ8NDV7 1962 aaKnown RBP18.73■□□□□ 0.59
SGMS1-208ENST00000608287 CCDC162PA2VCL2 907 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 MGAT4DA6NG13 374 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 OR51F1A6NGY5 319 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 LILRA5A6NI73 299 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 SGTAO43765 313 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 DNAJB5O75953 348 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 PSMA3P25788 255 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 VPS41P49754 854 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 SESN2P58004 480 aaPredicted RBP18.72■□□□□ 0.59
SGMS1-208ENST00000608287 UGT8Q16880 541 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 TSTD2Q5T7W7 516 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 METRNLQ641Q3 311 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 TMEM26Q6ZUK4 368 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 PIANPQ8IYJ0 282 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 PPHLN1Q8NEY8 458 aaKnown RBP18.72■□□□□ 0.59
SGMS1-208ENST00000608287 HDAC10Q969S8 669 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 SLC2A6Q9UGQ3 507 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 TCAF1Q9Y4C2 921 aa18.72■□□□□ 0.59
SGMS1-208ENST00000608287 IGLV3-16A0A075B6K0 115 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 KLHL33A6NCF5 533 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 KRT14P02533 472 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 PRLHRP49683 370 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 DBN1Q16643 649 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.71■□□□□ 0.59
SGMS1-208ENST00000608287 JMJD6Q6NYC1 403 aaPredicted RBP18.71■□□□□ 0.59
SGMS1-208ENST00000608287 CCDC137Q6PK04 289 aaKnown RBP18.71■□□□□ 0.59
SGMS1-208ENST00000608287 NLRP9Q7RTR0 991 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 SYVN1Q86TM6 617 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 TMEM135Q86UB9 458 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 PPP1R3BQ86XI6 285 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 OR13J1Q8NGT2 312 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 ACTRT1Q8TDG2 376 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.71■□□□□ 0.591e-8■■■■■ 58.8
SGMS1-208ENST00000608287 PNPLA2Q96AD5 504 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 LINC00615Q96LM1 132 aaPredicted RBP18.71■□□□□ 0.59
SGMS1-208ENST00000608287 C9orf72Q96LT7 481 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 ZNF778Q96MU6 729 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 OR6C1Q96RD1 312 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 TRIM55Q9BYV6 548 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 ZNF768Q9H5H4 540 aaKnown RBP18.71■□□□□ 0.59
SGMS1-208ENST00000608287 UCK1Q9HA47 277 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 SLC40A1Q9NP59 571 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 LHX9Q9NQ69 397 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 PYCARDQ9ULZ3 195 aa18.71■□□□□ 0.59
SGMS1-208ENST00000608287 POLQO75417 2590 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 AP3B1O00203 1094 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 ZNF185O15231 689 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 POLBP06746 335 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 FGF5P12034 268 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 ZNF28P17035 718 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 TYRP1P17643 537 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 FOXN2P32314 431 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 COILP38432 576 aaPredicted RBP18.7■□□□□ 0.58
SGMS1-208ENST00000608287 RPS15P62841 145 aaKnown RBP18.7■□□□□ 0.58
SGMS1-208ENST00000608287 GPS1Q13098 491 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 GPR18Q14330 331 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 RPE65Q16518 533 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 CYP1B1Q16678 543 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 AFTPHQ6ULP2 937 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 RBM12BQ8IXT5 1001 aaKnown RBP18.7■□□□□ 0.58
SGMS1-208ENST00000608287 CFAP206Q8IYR0 622 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 OR6P1Q8NGX9 317 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 WWP1Q9H0M0 922 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 ING2Q9H160 280 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 ACTL8Q9H568 366 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 ACSL5Q9ULC5 683 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 RIMKLBQ9ULI2 386 aa18.7■□□□□ 0.58
SGMS1-208ENST00000608287 GOLGA6L10A0A0M3HER8 536 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 CES2O00748 559 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 UBXN7O94888 489 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 GOT2P00505 430 aaKnown RBP18.69■□□□□ 0.58
SGMS1-208ENST00000608287 C9P02748 559 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 SLC35G4P0C7Q5 338 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 AMD1P17707 334 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 TPSB2P20231 275 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 NPY2RP49146 381 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 GNG11P61952 73 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 PRAMEP78395 509 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 CRADDP78560 199 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 CDK16Q00536 496 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 ACVR1Q04771 509 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 TPSAB1Q15661 275 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 PCID2Q5JVF3 399 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 LILRA3Q8N6C8 439 aaPredicted RBP18.69■□□□□ 0.58
SGMS1-208ENST00000608287 CLDN19Q8N6F1 224 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 GPR150Q8NGU9 434 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 HM13Q8TCT9 377 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 TCTN2Q96GX1 697 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 C12orf66Q96MD2 445 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 FCRL4Q96PJ5 515 aa18.69■□□□□ 0.58
SGMS1-208ENST00000608287 CCM2Q9BSQ5 444 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms