RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.1■□□□□ 0.17
PMF1-206ENST00000606952 ZNF678Q5SXM1 525 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 TTC19Q6DKK2 380 aaPredicted RBP16.1■□□□□ 0.17
PMF1-206ENST00000606952 PTGR2Q8N8N7 351 aaPredicted RBP16.1■□□□□ 0.17
PMF1-206ENST00000606952 SKA1Q96BD8 255 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 RHBDF1Q96CC6 855 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 FBXL8Q96CD0 374 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 CHMP6Q96FZ7 201 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 C7orf26Q96N11 449 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 TRMOQ9BU70 441 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 ERVK-6Q9BXR3 956 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 ERVMER34-1Q9H9K5 563 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 KLF15Q9UIH9 416 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 MOSPD1Q9UJG1 213 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 PILRBQ9UKJ0 227 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 KCNK6Q9Y257 313 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 DNAJC16Q9Y2G8 782 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 PLEKHM1Q9Y4G2 1056 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 GON4LQ3T8J9 2241 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 IFRD1O00458 451 aaPredicted RBP16.09■□□□□ 0.17
PMF1-206ENST00000606952 RPN2P04844 631 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 ANXA5P08758 320 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 ERGP11308 486 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 GFAPP14136 432 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 ITPKAP23677 461 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 ILF3Q12906 894 aaKnown RBP eCLIP16.09■□□□□ 0.174e-7■■■■□ 23.9
PMF1-206ENST00000606952 ABRQ12979 859 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 SRSF5Q13243 272 aaKnown RBP16.09■□□□□ 0.17
PMF1-206ENST00000606952 RCN2Q14257 317 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 UNC50Q53HI1 259 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 RAB44Q7Z6P3 723 aaPredicted RBP16.09■□□□□ 0.17
PMF1-206ENST00000606952 HID1Q8IV36 788 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 DCUN1D3Q8IWE4 304 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 TBC1D21Q8IYX1 336 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 SDR16C5Q8N3Y7 309 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 OR5K2Q8NHB8 316 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 MAGEC3Q8TD91 643 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 CNDP1Q96KN2 507 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 TMEM79Q9BSE2 394 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 GSDMCQ9BYG8 508 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 DRC3Q9H069 523 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 WWP1Q9H0M0 922 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 TMEM168Q9H0V1 697 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 MIR1-1HGQ9H1L0 117 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 THAP1Q9NVV9 213 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 CD274Q9NZQ7 290 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 FAM8A1Q9UBU6 413 aa16.09■□□□□ 0.17
PMF1-206ENST00000606952 TNPO3Q9Y5L0 923 aaKnown RBP16.09■□□□□ 0.17
PMF1-206ENST00000606952 ARHGEF17Q96PE2 2063 aaPredicted RBP16.08■□□□□ 0.16
PMF1-206ENST00000606952 GMNCA6NCL1 334 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 PRR33A8MZF0 331 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 TCP11X1B4DZS4 312 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 TAPBPO15533 448 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 GALR2O43603 387 aaPredicted RBP16.08■□□□□ 0.16
PMF1-206ENST00000606952 SNX2O60749 519 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 EDF1O60869 148 aaKnown RBP16.08■□□□□ 0.16
PMF1-206ENST00000606952 S100BP04271 92 aaPredicted RBP16.08■□□□□ 0.16
PMF1-206ENST00000606952 HIST1H2AGP0C0S8 130 aaPredicted RBP16.08■□□□□ 0.16
PMF1-206ENST00000606952 HIST1H2ADP20671 130 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 ARRB2P32121 409 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 SLC6A12P48065 614 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 DHPSP49366 369 aaPredicted RBP16.08■□□□□ 0.16
PMF1-206ENST00000606952 NAGLUP54802 743 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 STX3Q13277 289 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 TEAD4Q15561 434 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 PFKFB4Q16877 469 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 ZCCHC23Q6ZST2 131 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 FRMD7Q6ZUT3 714 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 SPDYE1Q8NFV5 336 aaPredicted RBP16.08■□□□□ 0.16
PMF1-206ENST00000606952 ZNF483Q8TF39 744 aaPredicted RBP16.08■□□□□ 0.16
PMF1-206ENST00000606952 SKA2Q8WVK7 121 aaPredicted RBP16.08■□□□□ 0.16
PMF1-206ENST00000606952 ATL1Q8WXF7 558 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 TFGQ92734 400 aaPredicted RBP16.08■□□□□ 0.16
PMF1-206ENST00000606952 HIST1H2AHQ96KK5 128 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 CCDC138Q96M89 665 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 SORT1Q99523 831 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 HIST1H2AJQ99878 128 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 H2AFJQ9BTM1 129 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 EPN3Q9H201 632 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 GSTO2Q9H4Y5 243 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 MVB12BQ9H7P6 319 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 APOBEC3BQ9UH17 382 aaKnown RBP16.08■□□□□ 0.16
PMF1-206ENST00000606952 TSR3Q9UJK0 312 aaKnown RBP16.08■□□□□ 0.16
PMF1-206ENST00000606952 WDR37Q9Y2I8 494 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 HEBP2Q9Y5Z4 205 aa16.08■□□□□ 0.16
PMF1-206ENST00000606952 NEFHP12036 1026 aa16.07■□□□□ 0.16
PMF1-206ENST00000606952 GNSP15586 552 aa16.07■□□□□ 0.16
PMF1-206ENST00000606952 AK4P27144 223 aaPredicted RBP16.07■□□□□ 0.16
PMF1-206ENST00000606952 MAP4P27816 1152 aaKnown RBP16.07■□□□□ 0.16
PMF1-206ENST00000606952 ACTR1BP42025 376 aa16.07■□□□□ 0.16
PMF1-206ENST00000606952 CTSKP43235 329 aa16.07■□□□□ 0.16
PMF1-206ENST00000606952 BDKRB1P46663 353 aa16.07■□□□□ 0.16
PMF1-206ENST00000606952 ACTR1AP61163 376 aa16.07■□□□□ 0.16
PMF1-206ENST00000606952 ABCE1P61221 599 aaKnown RBP16.07■□□□□ 0.16
PMF1-206ENST00000606952 CBX1P83916 185 aa16.07■□□□□ 0.16
PMF1-206ENST00000606952 GRB7Q14451 532 aa16.07■□□□□ 0.16
PMF1-206ENST00000606952 ANKS6Q68DC2 871 aa16.07■□□□□ 0.16
PMF1-206ENST00000606952 LAYNQ6UX15 382 aa16.07■□□□□ 0.16
PMF1-206ENST00000606952 ATG14Q6ZNE5 492 aa16.07■□□□□ 0.16
PMF1-206ENST00000606952 ARMCX6Q7L4S7 300 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms