RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 NR4A3Q92570 626 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 TADA1Q96BN2 335 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 TAAR6Q96RI8 345 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SRPK1Q96SB4 655 aaKnown RBP11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 TRIM56Q9BRZ2 755 aaKnown RBP11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 LHPPQ9H008 270 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 NUP62CLQ9H1M0 184 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SLC25A51Q9H1U9 297 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 XKR8Q9H6D3 395 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 FAM60AQ9NP50 221 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 TXLNGQ9NUQ3 528 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 IRAK4Q9NWZ3 460 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ACTR10Q9NZ32 417 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 MYO6Q9UM54 1294 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 HEBP2Q9Y5Z4 205 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SOCS6O14544 535 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 GAPDHSO14556 408 aaPredicted RBP11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 BUD23O43709 281 aaKnown RBP11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 UNC5CO95185 931 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 TMPRSS15P98073 1019 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 AP1B1Q10567 949 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 MFAP5Q13361 173 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ZIC1Q15915 447 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 HADHQ16836 314 aaKnown RBP11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SPESP1Q6UW49 350 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 TMEM207Q6UWW9 146 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ISLR2Q6UXK2 745 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 HOOK3Q86VS8 718 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CPNE8Q86YQ8 564 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 OR52E1Q8NGJ3 308 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 DTX3LQ8TDB6 740 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 NACC2Q96BF6 587 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 FAF2Q96CS3 445 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 RBM41Q96IZ5 413 aaKnown RBP11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 THOC3Q96J01 351 aaKnown RBP11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 FERD3LQ96RJ6 166 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SLC22A11Q9NSA0 550 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SMOXQ9NWM0 555 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 UBP1Q9NZI7 540 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 HEY1Q9Y5J3 304 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 HS3ST3B1Q9Y662 390 aa11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 MAP1AP78559 2803 aaPredicted RBP11.35□□□□□ -0.59
PDLIM1P1-201ENST00000604187 KLHL33A6NCF5 533 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 C19orf84I3L1E1 186 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 PYGMP11217 842 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CAPN3P20807 821 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CA7P43166 264 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 GABRA4P48169 554 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ARG2P78540 354 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 KLHL30Q0D2K2 578 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ITGA9Q13797 1035 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 PDK2Q15119 407 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SLC14A2Q15849 920 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 BCL7AQ4VC05 210 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 KIRREL2Q6UWL6 708 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 AMIGO1Q86WK6 493 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 MAP7D3Q8IWC1 876 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CFAP206Q8IYR0 622 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CCM2Q9BSQ5 444 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 NDC1Q9BTX1 674 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 HGH1Q9BTY7 390 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 THAP2Q9H0W7 228 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ISCUQ9H1K1 167 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 TRABDQ9H4I3 376 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 TFB2MQ9H5Q4 396 aaKnown RBP11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 IL17CQ9P0M4 197 aa11.34□□□□□ -0.59
PDLIM1P1-201ENST00000604187 KLHL18O94889 574 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PRAMEF1O95521 474 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 UGT2B7P16662 529 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ITGAXP20702 1163 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ALAS2P22557 587 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PBX1P40424 430 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CHRNA4P43681 627 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SRSF11Q05519 484 aaKnown RBP11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 Q0VFX4 171 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PRKG2Q13237 762 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 INAQ16352 499 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 RBBP7Q16576 425 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 TUBB8Q3ZCM7 444 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SARM1Q6SZW1 724 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SHISA6Q6ZSJ9 500 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 APTXQ7Z2E3 356 aaKnown RBP11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 GLT6D1Q7Z4J2 308 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ADGRF3Q8IZF5 1079 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PLD5Q8N7P1 536 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PHC3Q8NDX5 983 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 OR11G2Q8NGC1 345 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 HM13Q8TCT9 377 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 BLOC1S5Q8TDH9 187 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CHTF18Q8WVB6 975 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 FKBP10Q96AY3 582 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 MRM3Q9HC36 420 aaKnown RBP11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 GLOD4Q9HC38 313 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PKP3Q9Y446 797 aa11.33□□□□□ -0.6
PDLIM1P1-201ENST00000604187 A0A0A6YYK5 440 aaPredicted RBP11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 TRAV17A0A0B4J275 112 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 DYTNA2CJ06 578 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 LRRC10BA6NIK2 292 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 295.1 ms