RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 PLK1P53350 603 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 GTF2BQ00403 316 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 ILF3Q12906 894 aaKnown RBP eCLIP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 LMAN2Q12907 356 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 ART3Q13508 389 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 DGKZQ13574 1117 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 MANEAQ5SRI9 462 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 NUP54Q7Z3B4 507 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 CAMKMTQ7Z624 323 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 CRLF3Q8IUI8 442 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 TRAM1L1Q8N609 369 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 NANOGP1Q8N7R0 232 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 ZNF511Q8NB15 262 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 SMG8Q8ND04 991 aaKnown RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 BHLHE22Q8NFJ8 381 aaPredicted RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 OR10J5Q8NHC4 309 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 TFB1MQ8WVM0 346 aaKnown RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 REPS1Q96D71 796 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 CASD1Q96PB1 797 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 RBM4BQ9BQ04 359 aaKnown RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 DHRS4Q9BTZ2 278 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 EDEM2Q9BV94 578 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 RBM4Q9BWF3 364 aaKnown RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 ASCL3Q9NQ33 180 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 TMLHEQ9NVH6 421 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 XPR1Q9UBH6 696 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 RAPGEFL1Q9UHV5 662 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 RGPD5Q99666 1765 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 A8MV72 311 aaPredicted RBP8.72□□□□□ -1.01
COMMD3-215ENST00000602574 TRIM49D1C9J1S8 452 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 GPR25O00155 361 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 CD3EAPO15446 510 aaKnown RBP8.72□□□□□ -1.01
COMMD3-215ENST00000602574 B4GAT1O43505 415 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 HLA-EP13747 358 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 GGT5P36269 586 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 POLR2IP36954 125 aaKnown RBP8.72□□□□□ -1.01
COMMD3-215ENST00000602574 BCAT1P54687 386 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 UBAP2LQ14157 1087 aaKnown RBP8.72□□□□□ -1.01
COMMD3-215ENST00000602574 INPP5AQ14642 412 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 IRF4Q15306 451 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 LRRC26Q2I0M4 334 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 SLC25A24Q6NUK1 477 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 CNNM4Q6P4Q7 775 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 DEGS2Q6QHC5 323 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 TXNRD3Q86VQ6 643 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 C8orf59Q8N0T1 100 aaPredicted RBP8.72□□□□□ -1.01
COMMD3-215ENST00000602574 YIPF7Q8N8F6 280 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 MCFD2Q8NI22 146 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 MZB1Q8WU39 189 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 MYLPFQ96A32 169 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 LMF1Q96S06 567 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 KCNJ15Q99712 375 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 C1QTNF1Q9BXJ1 281 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 SLC26A6Q9BXS9 759 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 TRIM9Q9C026 710 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 ELOVL6Q9H5J4 265 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 DDX4Q9NQI0 724 aaKnown RBP8.72□□□□□ -1.01
COMMD3-215ENST00000602574 FAM217BQ9NTX9 383 aaPredicted RBP8.72□□□□□ -1.01
COMMD3-215ENST00000602574 GRHPRQ9UBQ7 328 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 CA14Q9ULX7 337 aa8.72□□□□□ -1.01
COMMD3-215ENST00000602574 TEX13CA0A0J9YWL9 993 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 A0A0U1RQV5 110 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 AKR7A2O43488 359 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 KLRC4O43908 158 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 SNNO75324 88 aaPredicted RBP8.71□□□□□ -1.01
COMMD3-215ENST00000602574 ZBTB7AO95365 584 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 PAK4O96013 591 aaPredicted RBP8.71□□□□□ -1.01
COMMD3-215ENST00000602574 C2P06681 752 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 CRHP06850 196 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 LINC00614P0C842 121 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 RNH1P13489 461 aaKnown RBP8.71□□□□□ -1.01
COMMD3-215ENST00000602574 ADRB3P13945 408 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 TCF4P15884 667 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 CD6P30203 668 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 CRATP43155 626 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 ARSFP54793 590 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 AQP5P55064 265 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 ERVK-25P63136 954 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 FOXO4P98177 505 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 RHDQ02161 417 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 RPL6Q02878 288 aaKnown RBP8.71□□□□□ -1.01
COMMD3-215ENST00000602574 SEC23BQ15437 767 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 SYT16Q17RD7 645 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 ZNF404Q494X3 552 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 CDNFQ49AH0 187 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 TEX44Q53QW1 395 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 TMEM67Q5HYA8 995 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 DNLZQ5SXM8 178 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 RIPPLY2Q5TAB7 128 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 DENND5AQ6IQ26 1287 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 ARMC6Q6NXE6 501 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 RSBN1LQ6PCB5 846 aaPredicted RBP8.71□□□□□ -1.01
COMMD3-215ENST00000602574 NUDT18Q6ZVK8 323 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 PGAP1Q75T13 922 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 CHST3Q7LGC8 479 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 NLRC3Q7RTR2 1065 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 LRRTM4Q86VH4 590 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 MCATQ8IVS2 390 aaKnown RBP8.71□□□□□ -1.01
COMMD3-215ENST00000602574 ZFPM1Q8IX07 1006 aa8.71□□□□□ -1.01
COMMD3-215ENST00000602574 RDH10Q8IZV5 341 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms